Factsheet for VIT_07s0151g00860.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042346_P001	Maize	plastid	42.79	72.88
Solyc09g047900.1.1	Tomato	plastid	64.18	67.19
AT4G12830.1	Thale cress	plastid	65.67	67.18
Bra032674.1-P	Field mustard	plastid	64.93	66.41
CDY39712	Canola	plastid	64.93	66.41
Os01t0919700-01	Rice	mitochondrion	62.44	66.23
CDY60486	Canola	plastid	64.43	65.9
KRH66302	Soybean	plastid	71.39	64.79
GSMUA_Achr10P...	Banana	plastid	59.7	63.32
TraesCS3A01G426600.1	Wheat	mitochondrion	58.71	62.77
TraesCS3D01G421500.1	Wheat	mitochondrion	58.71	62.77
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	58.71	57.14
OQU88111	Sorghum	cytosol	60.95	56.98
TraesCS3B01G462800.1	Wheat	plastid	58.96	56.03
PGSC0003DMT400075010	Potato	plastid	8.21	35.11
VIT_09s0002g07500.t01	Wine grape	plastid	25.62	26.89
KRG88518	Soybean	extracellular, plastid	4.73	13.38

Protein Annotations

EntrezGene:100244633	wikigene:100244633	Gene3D:3.40.50.1820	MapMan:35.2	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
ProteinID:CCB48291	ProteinID:CCB48291.1	UniProt:F6H7U9	EMBL:FN595253	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR029058	EntrezGene:LOC100244633
wikigene:LOC100244633	PFAM:PF00561	PRINTS:PR00111	PANTHER:PTHR43329	PANTHER:PTHR43329:SF26	SUPFAM:SSF53474
TIGR:TC53908	UniParc:UPI000210982D	ArrayExpress:VIT_07s0151g00860	EnsemblPlantsGene:VIT_07s0151g00860	EnsemblPlants:VIT_07s0151g00860.t01	unigene:Vvi.9971
RefSeq:XP_002271124	RefSeq:XP_002271124.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7_random:+:1095660..1103520

Molecular Weight (calculated)

45177.9 Da

IEP (calculated)

8.521

GRAVY (calculated)

-0.323

Length

402 amino acids

Sequence
(BLAST)

001: MAFQAPHLSS LHSLHFCIAS PSCLVRSPRS TAPIRRTKSL RLRIRSSSDD DYYIDAPVSV GDGFSFGGGK YSEEPSPSDE WFEKGNIVKA HPVLGSGKKA
101: SDPIFGLKMG AGSQASDDLF RWFCIESGSP DNHSVILIHG FPSQAYSYRK VLPVLSKKYH AIAFDWLGFG FSDKPQPKYG FDYTLDEYVS SFGSLINELV
201: TDKVSLVVQG YFSPVVVKYA SSHQEKIKDL ILLNPPLTAK HANLPSALSI FSNFLLGEIF SQDPLRASDK ALTSCGPYQM KEDDAMVYRR PYLTSGSSGF
301: ALNAISRSMK KELKKYVEEM RTILIDKDWK VQTTICWGER DRWLSYDGVE DFCKRSNHKL LKLPMAGHHV QEDCGEELGQ VINGVLSRRP KCFMPWRQLI
401: DR

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.