Factsheet for TraesCS3D01G421500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G426600.1	Wheat	mitochondrion	98.4	98.4
HORVU3Hr1G093990.1	Barley	cytosol, mitochondrion, plastid	96.81	88.14
TraesCS3B01G462800.1	Wheat	plastid	97.34	86.52
Zm00001d042346_P001	Maize	plastid	52.39	83.47
Os01t0919700-01	Rice	mitochondrion	80.85	80.21
OQU88111	Sorghum	cytosol	77.39	67.67
GSMUA_Achr10P...	Banana	plastid	60.37	59.89
VIT_07s0151g00860.t01	Wine grape	plastid	62.77	58.71
CDY39712	Canola	plastid	60.64	58.02
Bra032674.1-P	Field mustard	plastid	60.64	58.02
Solyc09g047900.1.1	Tomato	plastid	58.24	57.03
CDY60486	Canola	plastid	59.31	56.74
AT4G12830.1	Thale cress	plastid	59.04	56.49
KRH66302	Soybean	plastid	64.1	54.4
PGSC0003DMT400075010	Potato	plastid	6.91	27.66
TraesCS2D01G519500.2	Wheat	plastid	24.73	23.31
KRG88518	Soybean	extracellular, plastid	4.26	11.27

Protein Annotations

EnsemblPlants:TraesCS3D01G421500.1	EnsemblPlantsGene:TraesCS3D01G421500	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR43329	PANTHER:PTHR43329:SF26	PFAM:PF00561	PRINTS:PR00111	SEG:seg	SUPFAM:SSF53474
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:533867993..533872587

Molecular Weight (calculated)

41811.6 Da

IEP (calculated)

7.010

GRAVY (calculated)

-0.337

Length

376 amino acids

Sequence
(BLAST)

001: MAPPLAAPRF HAALPRGLLL RPRKPLRSWR RAARPDDQDL YVDDDIGDGF SFSGGKYAEA EGPSKSDEWF AQGRMVKAHA LYGNKEKAKD PFFGLTMGSG
101: SQSSGDVFNW FCVEAGSSSN PTVLLIHGFP SQAYSYRNVL PVLSDKYRSI AFDWLGFGFS DKPQPKYGFD YTLDEYTSAL ESLIDAVAPD KLSIVVQGYF
201: APIVVKYANE HQDKLNHLIL VNPPITDKHA KLPSTLACFS NFLLGEVFSQ DPLRASDKAL TSSGPYMMKE EDATVYRRPY LVSGASGFAL NAITRAMGKD
301: LKAYIESMRS ILASDSWNTK TTICWGLRDR WLTYDGVEDF CDGLKHNVVQ LPMAGHHAQE DRGEELGNII KRILRG

Best Arabidopsis Sequence Match ( AT4G12830.1 )
(BLAST)

001: MAVHIHNPNF FHTHHLRASL TSASASPSSY LFHRHSASKY PSFLCKSNNK DDYLIDAPVS VGDGFSFSGG KYSDQPSPSD EWLKQGKWVK AHRVGGSGVE
101: AKDPIFGLTM GASSQASKDL FRWFSVESGS VDSPPVILIH GFPSQAYSYR KTIPVLSKNY RAIAFDWLGF GFSDKPQAGY GFNYTMDEFV SSLESFIDEV
201: TTSKVSLVVQ GYFSAAVVKY ARNRPDKIKN LILLNPPLTP EHAKLPSTLS VFSNFLLGEI FSQDPLRASD KPLTSCGPYK MKEDDAMVYR RPYLTSGSSG
301: FALNAISRSM KKELKKYAEE MRTSLMDKNW KIPITVCWGQ RDRWLSYEGV EEFCKSSGHN LVELPNAGHH VQEDCGEELG GIISRIISKS ALF

Arabidopsis Description

AT4g12830/T20K18_180 [Source:UniProtKB/TrEMBL;Acc:Q93ZN4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.