Factsheet for GSMUA_Achr9P06040_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	59.11	66.96
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	66.41	64.23
GSMUA_Achr4P21190_001	Banana	cytosol	19.79	37.81
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	35.68	36.34
GSMUA_Achr10P...	Banana	cytosol	41.41	36.05
GSMUA_AchrUn_...	Banana	cytosol	35.42	35.88
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	34.9	35.73
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	36.98	35.15
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	36.72	34.73
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	34.9	33.5
GSMUA_Achr8P11920_001	Banana	cytosol	30.73	32.87
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	31.51	32.79
GSMUA_Achr8P26800_001	Banana	cytosol	30.73	31.55
GSMUA_Achr3P14930_001	Banana	cytosol	30.99	31.4
GSMUA_Achr1P02670_001	Banana	mitochondrion	10.68	28.67
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	30.21	27.42
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	30.21	26.48
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	31.51	26.36
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	29.43	26.34
GSMUA_Achr3P17450_001	Banana	nucleus	27.6	23.61
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	5.21	22.22
GSMUA_Achr11P...	Banana	mitochondrion	11.2	21.61
GSMUA_Achr1P19900_001	Banana	cytosol	12.5	20.6
GSMUA_Achr8P19690_001	Banana	mitochondrion	13.54	18.91
GSMUA_Achr4P30750_001	Banana	mitochondrion	10.68	15.3
GSMUA_Achr8P26180_001	Banana	mitochondrion	19.79	14.48
GSMUA_Achr2P15790_001	Banana	cytosol	20.05	13.44
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	19.01	13.18
GSMUA_AchrUn_...	Banana	mitochondrion	16.41	12.45
GSMUA_Achr3P11240_001	Banana	nucleus	21.09	10.37
GSMUA_Achr1P06080_001	Banana	nucleus	19.27	9.5
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	20.57	9.34
GSMUA_Achr1P19910_001	Banana	nucleus	9.38	6.02

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr9G06040_001	EnsemblPlants:GSMUA_Achr9P06040_001	EnsemblPlants:GSMUA_Achr9T06040_001	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:M0TXW3
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF10	SMART:SM00015
UniParc:UPI0002966A89	SEG:seg	:	:	:	:

Description

Putative IQ calmodulin-binding motif family protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G06040_001]

Coordinates

chr9:-:3862608..3864319

Molecular Weight (calculated)

43158.6 Da

IEP (calculated)

11.168

GRAVY (calculated)

-0.739

Length

384 amino acids

Sequence
(BLAST)

001: MGRAARWLRS FLGGKKDTKG QKDDASTSGH DTRDRKRWSF AGPQQAASMA TAAAANAAVT AAQAAMVRLK SLGTERTTPY GIYERWAAVK IQTAFRCYLA
101: KKALRALKAL VKLQALVRGY LVRKQAAITL RRLQALVRAQ SVARPREARA LPQQGRRLDA QVCHRRSFER FNVRDARCKP TGSEESHGLD RSPKIVEMDT
201: FQLKSKSFRR TGSSSFNALE EPTVPLSSPL AHKIPSRLSI PSCRSSRDYH YYRNPERSPC SKTAQNTPRL NPQTPPRYMN ITADVVVWHT PSPANSPNYM
301: ANTSSSAAKL RPQSTPKQRP EKANRRKKLY ANETVPGTSL SDTWSPLQEH EAYCNLKYGM VGRINRTAKM VKEAARDYYL DSMW

Best Arabidopsis Sequence Match ( AT4G29150.1 )
(BLAST)

001: MRKNLTKLTR VKRETKMGRA TRWFKGLFGI KPSSCSGTDS GTISNRLDRS LCDSYETIPP NISEKEAAWL RSFYAAGEEE KERRTHAIAV AAATAAAADA
101: AVAAAKAAAA VVRLQGQGKS GPLGGGKSRE HRAAMQIQCA FRGYLARKAL RALRGVVKIQ ALVRGFLVRN QAAATLRSME ALVRAQKTVK IQRALRRNGN
201: AAPARKSTER FSGSLENRNN GEETAKIVEV DTGTRPGTYR IRAPVLSGSD FLDNPFRRTL SSPLSGRVPP RLSMPKPEWE ECSSKFPTAQ STPRFSGGSP
301: ARSVCCSGGG VEAEVDTEAD ANRFCFLSGE FNSGYMADTT SFRAKLRSHS APRQRPESNA SAGGWRRSIG GGGVRMQRQS CSGVREAVVG NIERRRMRW

Arabidopsis Description

IQD25IQ-domain 25 [Source:UniProtKB/TrEMBL;Acc:F4JMV6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.