Factsheet for GSMUA_Achr8P19690_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	10.55	32.22
GSMUA_Achr4P21190_001	Banana	cytosol	14.18	19.4
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	20.36	14.93
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	21.82	14.85
GSMUA_Achr3P14930_001	Banana	cytosol	20.36	14.78
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	21.09	14.5
GSMUA_Achr8P11920_001	Banana	cytosol	18.18	13.93
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	18.91	13.79
GSMUA_Achr8P26800_001	Banana	cytosol	18.55	13.64
GSMUA_Achr9P06040_001	Banana	cytosol	18.91	13.54
GSMUA_AchrUn_...	Banana	cytosol	18.55	13.46
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	16.36	13.27
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	19.27	13.05
GSMUA_Achr10P...	Banana	cytosol	20.73	12.93
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	18.55	12.85
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	20.0	12.82
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	19.64	12.33
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	18.55	12.06
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	20.0	11.98
GSMUA_Achr2P15790_001	Banana	cytosol	22.91	10.99
GSMUA_Achr3P17450_001	Banana	nucleus	17.45	10.69
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	21.45	10.65
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	13.82	10.3
GSMUA_Achr1P02670_001	Banana	mitochondrion	5.09	9.79
GSMUA_Achr8P26180_001	Banana	mitochondrion	18.55	9.71
GSMUA_Achr4P30750_001	Banana	mitochondrion	9.09	9.33
GSMUA_AchrUn_...	Banana	mitochondrion	14.55	7.91
GSMUA_Achr11P...	Banana	mitochondrion	5.45	7.54
GSMUA_Achr1P19910_001	Banana	nucleus	15.64	7.19
GSMUA_Achr3P11240_001	Banana	nucleus	18.18	6.4
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	18.55	6.03
GSMUA_Achr1P19900_001	Banana	cytosol	5.09	6.01
GSMUA_Achr1P06080_001	Banana	nucleus	16.73	5.91

Protein Annotations

EnsemblPlants:GSMUA_Achr8P19690_001	EnsemblPlants:GSMUA_Achr8T19690_001	EnsemblPlantsGene:GSMUA_Achr8G19690_001	InterPro:DUF4005	PANTHER:PTHR32295	PANTHER:PTHR32295:SF33
PFAM:PF13178	SEG:seg	UniParc:UPI00029669EB	UniProt:M0TRX2	MapMan:35.2	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G19690_001]

Coordinates

chr8:-:24874207..24875388

Molecular Weight (calculated)

29921.7 Da

IEP (calculated)

10.321

GRAVY (calculated)

-0.871

Length

275 amino acids

Sequence
(BLAST)

001: MQSLVRVQAL ARAHRLQLAS HRNLLFSPSP TTAPAYHDPC HLRHLERGAA PRDRLQDLYF MKGGDVGDEV DGGGHRLSEW DGRQQSSDSI THEKVQWGWN
101: WLERWMGAQQ WGGQHGAPPP QPVSSYVTAT AMDGLSEKTV EMDTGRRSPV NPTHYSYHLR DEPAQPAAVP SYMAATQSAR AKVRAQVPVA KPHEPKRNAA
201: TRRSRARSDN AADSSSSGGG TSTTINPAAR SPSHTGVALG MQTRRHRAYS PDSSCGGHDR TPSSGGRGRL TAVND

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.