Factsheet for GSMUA_Achr11P03270_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62070.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT5G62070.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P11920_001	Banana	cytosol	56.03	66.02
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	66.19	61.0
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	52.96	52.21
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	52.48	50.68
VIT_02s0025g04120.t01	Wine grape	mitochondrion	47.75	40.89
Solyc08g007920.1.1	Tomato	cytosol	21.75	39.32
Solyc08g007930.1.1	Tomato	cytosol	20.8	38.77
KRH03972	Soybean	cytosol	40.19	38.03
KRH77498	Soybean	cytosol, mitochondrion	35.22	37.63
KRH57246	Soybean	cytosol	39.24	37.3
GSMUA_Achr4P21190_001	Banana	cytosol	17.26	36.32
CDX78285	Canola	plastid	29.31	36.05
VIT_16s0100g00620.t01	Wine grape	cytosol	28.37	36.04
CDX70019	Canola	cytosol, mitochondrion	30.02	35.88
Bra009281.1-P	Field mustard	mitochondrion	30.02	35.88
CDX98994	Canola	mitochondrion	30.02	35.88
Bra005929.1-P	Field mustard	plastid	29.08	35.86
KRG91452	Soybean	cytosol	37.83	35.09
KRH35361	Soybean	cytosol, mitochondrion	38.3	34.91
CDX98787	Canola	mitochondrion	24.35	34.8
Solyc08g080470.2.1	Tomato	plastid	40.9	34.67
KRH09113	Soybean	cytosol	39.01	34.59
KRH38565	Soybean	cytosol	39.24	34.44
PGSC0003DMT400007855	Potato	cytosol, plastid	40.43	34.2
AT5G62070.1	Thale cress	cytosol, plastid	31.91	33.5
CDX86928	Canola	mitochondrion, plastid	30.73	32.99
CDY00253	Canola	plastid	30.73	32.99
Bra010055.1-P	Field mustard	plastid	30.97	32.35
PGSC0003DMT400014796	Potato	cytosol	27.42	32.22
CDX98786	Canola	nucleus	36.17	32.21
Bra019337.1-P	Field mustard	nucleus	35.7	32.06
CDX81042	Canola	plastid	29.31	32.04
AT4G23060.1	Thale cress	mitochondrion, nucleus	36.64	32.02
CDY00251	Canola	plastid	30.97	31.87
CDY41252	Canola	cytosol, mitochondrion	36.64	31.76
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	36.41	31.69
CDY53133	Canola	nucleus	36.41	31.69
CDY41368	Canola	mitochondrion, plastid	31.44	31.67
Bra013672.1-P	Field mustard	mitochondrion, nucleus	37.12	31.65
CDX94150	Canola	nucleus	34.52	31.47
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	35.22	31.3
Bra020822.1-P	Field mustard	mitochondrion, plastid	30.73	30.95
CDX76341	Canola	mitochondrion, plastid	30.73	30.95
GSMUA_Achr9P06040_001	Banana	cytosol	27.42	30.21
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	28.13	29.97
GSMUA_Achr8P26800_001	Banana	cytosol	26.48	29.95
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	26.24	29.6
GSMUA_Achr1P02670_001	Banana	mitochondrion	9.93	29.37
AT5G07240.2	Thale cress	plastid	30.97	29.31
GSMUA_Achr3P14930_001	Banana	cytosol	26.24	29.29
GSMUA_Achr10P...	Banana	cytosol	30.5	29.25
GSMUA_AchrUn_...	Banana	cytosol	25.77	28.76
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	25.06	28.73
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	25.3	28.38
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	22.7	28.32
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	26.71	27.97
GSMUA_Achr11P...	Banana	mitochondrion	12.53	26.63
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	25.06	26.5
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	25.06	26.11
GSMUA_Achr3P17450_001	Banana	nucleus	24.11	22.72
GSMUA_Achr1P19900_001	Banana	cytosol	10.87	19.74
GSMUA_Achr8P19690_001	Banana	mitochondrion	12.06	18.55
GSMUA_Achr8P26180_001	Banana	mitochondrion	20.33	16.38
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	3.31	15.56
GSMUA_Achr4P30750_001	Banana	mitochondrion	9.69	15.3
GSMUA_AchrUn_...	Banana	mitochondrion	18.2	15.22
GSMUA_Achr2P15790_001	Banana	cytosol	19.86	14.66
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	18.91	14.44
GSMUA_Achr1P06080_001	Banana	nucleus	22.22	12.07
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	22.46	11.23
GSMUA_Achr3P11240_001	Banana	nucleus	20.09	10.88
GSMUA_Achr1P19910_001	Banana	nucleus	11.58	8.19

Protein Annotations

EnsemblPlants:GSMUA_Achr11P03270_001	EnsemblPlants:GSMUA_Achr11T03270_001	EnsemblPlantsGene:GSMUA_Achr11G03270_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295
PANTHER:PTHR32295:SF52	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
UniParc:UPI0002952A91	UniProt:M0RP07	MapMan:35.2	:	:	:

Description

IQ calmodulin-binding motif family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G03270_001]

Coordinates

chr11:+:2350990..2353254

Molecular Weight (calculated)

46832.4 Da

IEP (calculated)

11.015

GRAVY (calculated)

-0.765

Length

423 amino acids

Sequence
(BLAST)

001: MGRTARWLRG LLPRKKADPR EPPLEQKDKR RWGFASPAVS EERKGSYRET PRSYVMVAEG RQNERAIAVA AATAAAAEAT MAAAQAREEW AAVKIQSALR
101: GYLARRALRA LRGLVKLQAL VRGNIVRKQA AQTLRCMEAL VRVQARARAC RALRSERSSS DKCPPPRAGP PTPEKYERTV RANASNSDRS CALKRIPSNN
201: AGNIAAWNMF HRWMEERYWN SREAAAKKAG SSASMDDERS SKILEVEDPV KTQLTHERNN HHQCACSTLT PDRKSHSFTA VQDSPLKDFS TLQQSVRSPP
301: SVAMQRCLSS MRFPFESVDF VASPQFLYTS SRRGDARKGC FTPSKNECAR SLFDGSADHP NYMANTESSR AKARSQSAPK QRPENDKSGS GSLQRSSALH
401: AKLANRAYTG AGRLDSLGMP PGI

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.