CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033280_P001	Maize	cytosol, mitochondrion	83.67	86.68
Os03t0636700-00	Rice	mitochondrion	66.33	72.71
TraesCS5A01G377500.1	Wheat	cytosol	67.76	71.86
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	67.76	71.86
TraesCS5D01G387500.1	Wheat	cytosol	67.76	71.71
HORVU5Hr1G093430.4	Barley	cytosol	68.37	71.58
GSMUA_Achr3P14930_001	Banana	cytosol	38.78	50.13
GSMUA_Achr8P26800_001	Banana	cytosol	37.55	49.2
KXG40135	Sorghum	cytosol, mitochondrion	39.39	46.39
VIT_05s0020g03980.t01	Wine grape	cytosol	42.86	45.26
CDY36861	Canola	nucleus	34.08	44.65
CDY50677	Canola	nucleus	33.47	44.57
Bra039715.1-P	Field mustard	nucleus, plastid	33.47	44.32
CDY29768	Canola	cytosol	14.9	43.71
KRH35475	Soybean	cytosol	41.43	43.28
KRG91354	Soybean	cytosol, plastid	41.02	42.95
OQU91764	Sorghum	mitochondrion, plastid	43.67	42.38
KRH69109	Soybean	nucleus	35.1	41.25
Bra036898.1-P	Field mustard	cytosol	30.61	40.98
KRH31669	Soybean	cytosol, mitochondrion	35.31	40.9
OQU79535	Sorghum	cytosol, mitochondrion	37.55	39.74
CDY64325	Canola	cytosol	29.59	38.87
AT4G14750.3	Thale cress	cytosol	33.27	35.43
VIT_14s0030g01880.t01	Wine grape	nucleus	25.71	32.23
EES12687	Sorghum	cytosol, mitochondrion	30.0	31.48
KXG21487	Sorghum	cytosol, mitochondrion	28.57	28.4
KRH68719	Soybean	cytosol	21.43	28.07
KRG96957	Soybean	cytosol	21.02	27.84
EES02320	Sorghum	mitochondrion	27.14	27.71
KXG33342	Sorghum	mitochondrion	21.43	26.52
KXG22374	Sorghum	mitochondrion	21.43	26.32
KXG30089	Sorghum	cytosol, mitochondrion, plastid	10.2	22.22
EER94844	Sorghum	cytosol	22.24	21.84
OQU93295	Sorghum	plastid	11.43	19.79
KXG22418	Sorghum	cytosol, plastid	18.57	15.72
KXG33252	Sorghum	cytosol	16.12	14.13
KXG30090	Sorghum	mitochondrion	8.78	13.96
EES11606	Sorghum	nucleus	17.96	9.93

Protein Annotations

EnsemblPlants:EER93770	EnsemblPlantsGene:SORBI_3001G160100	EntrezGene:8062235	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF37
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:EER93770	ProteinID:EER93770.1	RefSeq:XP_002466772.1
SEG:seg	SMART:SM00015	UniParc:UPI0001A82B81	UniProt:C5WS34	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:-:13101204..13103489

Molecular Weight (calculated)

52290.7 Da

IEP (calculated)

10.853

GRAVY (calculated)

-0.524

Length

490 amino acids

Sequence
(BLAST)

001: MGKAGKWLRS FLPGRRSRDK GGPLAPPAAE PDLSLALPFP LPGAATPGAK EKRRWSFRRP AAASPGPGSA AKDAAAQGRL APYGLLEPRV DPDQHAVAVA
101: IATAAAAEAA MAAKQAAAAV VRLSASAPGS KRTVIGIEEA AAIKIQAVFR SYLARKALCA LRGLVKLQAL VRGHLVRRQA SHTLRCMQAL VAAQNRARAA
201: RLRMLDDEKP VRTPRTTPTR RSSPHHPRLR HHQDMAEENV KIVEVDTGAG GVDVHGTPRT SSRRSSCYAT PLCRTPSKNE LYQKISPTPS ALTDASARTY
301: SGRYDDFSFA TARASPYRYA YAPSRQQLQQ QHYHHHHHHD EGADDDKPAA DHPLLVPSYM ANTESSRAKA RSQSAPRQRL SVSSSSASAA TAEVAWQPSG
401: SGRRRASLEA QAQATPGARG LVAPRYGYGP ARVQRCPSQA SAPGACPWGA RLDRWSASAH DSECGSTSTV MTAATTPYCW SLTADNAGMA

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.