Factsheet for VIT_14s0108g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g01790.t01	Wine grape	cytosol	51.04	51.04
VIT_17s0000g05840.t01	Wine grape	endoplasmic reticulum, extracellular	51.73	47.99
KRH56937	Soybean	cytosol	48.27	47.61
KRH03447	Soybean	nucleus	48.1	47.28
KRH54515	Soybean	cytosol	47.06	46.58
KRH63392	Soybean	cytosol	46.89	46.48
GSMUA_Achr8P26180_001	Banana	mitochondrion	38.75	42.67
Os05t0535900-01	Rice	cytosol	41.7	41.99
GSMUA_AchrUn_...	Banana	mitochondrion	36.51	41.7
KXG22418	Sorghum	cytosol, plastid	40.83	40.76
TraesCS1A01G357500.3	Wheat	cytosol, mitochondrion, plastid	39.97	39.9
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	39.97	39.9
Zm00001d038838_P001	Maize	mitochondrion	39.62	39.9
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	39.45	39.38
Zm00001d011138_P003	Maize	cytosol, plastid	39.97	39.09
HORVU1Hr1G080360.4	Barley	mitochondrion	38.93	38.2
Os01t0716200-01	Rice	nucleus	37.89	38.15
KXG33252	Sorghum	cytosol	36.33	37.57
TraesCS3A01G244100.1	Wheat	cytosol, plastid	34.78	36.68
TraesCS3D01G247300.1	Wheat	cytosol, plastid	34.6	36.5
TraesCS3B01G276000.1	Wheat	cytosol, plastid	34.6	36.5
Zm00001d043655_P002	Maize	mitochondrion	35.12	35.3
HORVU3Hr1G067750.8	Barley	cytosol, plastid	32.53	33.81
VIT_00s0684g00020.t01	Wine grape	mitochondrion	7.09	29.93
VIT_16s0100g00620.t01	Wine grape	cytosol	14.71	25.53
VIT_09s0002g03360.t01	Wine grape	cytosol, mitochondrion	16.95	24.38
VIT_05s0020g03980.t01	Wine grape	cytosol	19.55	24.35
VIT_11s0016g03030.t01	Wine grape	cytosol	18.17	24.14
VIT_02s0025g04120.t01	Wine grape	mitochondrion	20.42	23.89
VIT_13s0019g01830.t01	Wine grape	mitochondrion, nucleus	19.38	23.88
VIT_08s0007g05960.t01	Wine grape	cytosol	17.13	23.29
VIT_14s0030g01880.t01	Wine grape	nucleus	14.53	21.48
VIT_08s0007g05980.t01	Wine grape	cytosol	15.4	19.69
VIT_18s0001g13870.t01	Wine grape	nucleus	22.49	16.41

Protein Annotations

MapMan:35.1	ProteinID:CCB47514	ProteinID:CCB47514.1	InterPro:DUF4005	UniProt:F6H5P3	EMBL:FN595239
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF42	SMART:SM00015	TIGR:TC60883
UniParc:UPI000210A68F	ArrayExpress:VIT_14s0108g00150	EnsemblPlantsGene:VIT_14s0108g00150	EnsemblPlants:VIT_14s0108g00150.t01	SEG:seg	:

Description

No Description!

Coordinates

chr14:+:28944147..28951192

Molecular Weight (calculated)

63584.6 Da

IEP (calculated)

10.457

GRAVY (calculated)

-0.717

Length

578 amino acids

Sequence
(BLAST)

001: MGKSPGKWIK TLLFGKKSSK SNFSKKAATE REAFIAVKAQ SGDLALDPPV VSVPAPHTTD RSGGNLVLER ATTDNLPHDV VLLSPGSQDV DTKANVELGL
101: PNNTDIIRLE QAATKAQAAF RGYLARRAFR ALKGIIRLQA LVRGHLVRRQ AVATLLCVQG IVKLQALIRG QRVRLSDAGL EVHKKCSLGK PLDDKEVVSG
201: GVNKSTQPKE LSPNAFVNKL LASLPTALPL KLQYDPVDPN SAANWVERWS LSFFWKPLPQ PKKVDNLKSQ RKQGNIQSGE SEVGRPKRGS RRVSTVSVEN
301: NSLLSSSEYE KPKRTQRKSL SHQAETVQDH PQSELERVKR NLRKVSASVT EVPDKMEAVT EKPKQSQRKV SGFPAPDTDT EPSPKLSIEP KQTEGETHPK
401: LSGELEQTEL ELPPKPLALD EIVDVSQDHL LAVEAHPLEN GGKVENTPVV NEEISCMEDQ TTKDNKRTRR RKSLPAKQEC SENVSHNTPT LPSYMAATES
501: AKAKLRAQGS PRFGQDGSEN GFVRRHSLPS STNGKLSSMS PRVQRLVQAS GKGGSKNDRS LLSSRDCHEK VVQTEWRR

Best Arabidopsis Sequence Match ( AT1G74690.1 )
(BLAST)

001: MGKSTKWLKN VLLGKKTSKS SGSKDKERVV SGKEVLVTSK VEESDVVSDL PSFEVAETNT VDRSGGMLET QNVGPEEISD DEIELPEGKS TDSQNVAPVQ
101: DHSLSDAERI QREIAATSVQ AAFRGYLARR AFWALKGIIR LQALIRGHLV RRQAVATLFS VMGIVRLQAF ARGREIRKSD IGVQVYRKCR LQLLQGNKLA
201: NPTDAYLGIK KLTANAFAQK LLASSPKVLP VHAYDTSNPN SNLIWLENWS ASCFWKPVPQ PKKTISRKPQ NRLLVEAESA KPKKSVRKVP ASNFESSSVQ
301: TSFEFEKPKR SFRKVSSQSI EPPAVEDPQI ELEKVKRSLR KVHNPVVESS IQPQRSPRKE VEKPKLGVEK TRESSYPLVH ETAEEPVNVC DEKKKQEISE
401: QPEEEVHALE MEVHTPGPLE TNEALDSSLV NQIDSNEKAM VEEKPSMEKD TKEEKTPKPN NKENSAGKEN QKSRKKGSAT SKTEREESNG HHETSPSIPS
501: YMQATKSAKA KLRLQGSPKS AEQDGTEKAT VPRRHSLPSP GNGRITSHSP RTTRLANSGD KTGNKKEKPL LSSREGNAKT TPAERKR

Arabidopsis Description

IQD31Protein IQ-DOMAIN 31 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4D8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.