Factsheet for Zm00001d032932_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91764	Sorghum	mitochondrion, plastid	86.68	73.47
HORVU2Hr1G106550.2	Barley	mitochondrion	64.02	63.13
TraesCS2A01G470100.1	Wheat	cytosol, mitochondrion	64.02	63.13
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	64.02	62.7
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	63.55	62.39
Os10t0420200-01	Rice	mitochondrion	45.09	56.76
Zm00001d048437_P002	Maize	mitochondrion	50.93	55.05
HORVU6Hr1G003870.1	Barley	cytosol, mitochondrion	39.25	54.55
HORVU4Hr1G056380.1	Barley	cytosol, mitochondrion	41.82	53.59
GSMUA_Achr4P21190_001	Banana	cytosol	22.43	47.76
Zm00001d033280_P001	Maize	cytosol, mitochondrion	44.86	40.59
Solyc09g082560.2.1	Tomato	nucleus	43.69	40.04
PGSC0003DMT400016500	Potato	nucleus	24.3	39.1
Zm00001d041437_P001	Maize	cytosol, mitochondrion	40.19	38.83
Zm00001d002630_P002	Maize	mitochondrion	30.37	28.45
Zm00001d010795_P001	Maize	cytosol, mitochondrion	21.26	27.91
Zm00001d012767_P001	Maize	cytosol, mitochondrion	21.03	27.52
Zm00001d010366_P001	Maize	cytosol, mitochondrion	29.67	27.08
Zm00001d037688_P001	Maize	mitochondrion	29.21	27.06
Zm00001d026084_P001	Maize	mitochondrion	31.07	26.81
Zm00001d008819_P001	Maize	mitochondrion	27.57	25.32
Zm00001d038793_P001	Maize	cytosol	21.96	24.74
Zm00001d039510_P001	Maize	cytosol, mitochondrion	27.57	24.53
Zm00001d043510_P001	Maize	mitochondrion, nucleus	22.66	23.66
Zm00001d029197_P001	Maize	nucleus	25.93	23.32
Zm00001d015969_P001	Maize	cytosol, mitochondrion, plastid	23.36	19.88
Zm00001d048352_P001	Maize	mitochondrion	11.92	18.55
Zm00001d011138_P003	Maize	cytosol, plastid	20.79	15.06
Zm00001d038838_P001	Maize	mitochondrion	20.09	14.98
Zm00001d043655_P002	Maize	mitochondrion	18.46	13.74
Zm00001d001953_P003	Maize	nucleus	21.03	9.81
Zm00001d026535_P003	Maize	nucleus	20.33	9.66

Protein Annotations

EMBL:KJ728417	EnsemblPlants:Zm00001d032932_P001	EnsemblPlants:Zm00001d032932_T001	EnsemblPlantsGene:Zm00001d032932	EntrezGene:103643558	Gene3D:1.20.5.190
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS
PANTHER:PTHR32295	PANTHER:PTHR32295:SF11	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:ONM06355.1
SEG:seg	SMART:SM00015	UniParc:UPI0002214819	UniProt:A0A060D8B5	MapMan:35.2	:

Description

IQ-domain 19

Coordinates

chr1:+:243649592..243651383

Molecular Weight (calculated)

46239.4 Da

IEP (calculated)

10.594

GRAVY (calculated)

-0.604

Length

428 amino acids

Sequence
(BLAST)

001: MGKAGRWLKS ILAGRKSGVR DKALRHQQQQ GDATPLPAAS SPREKRRWSF RRPATAPTKQ EGKANNAAPS PLSSLEPSAR ELDQSEHAVA AAAAATEVAR
101: LTAADESHLS VSCCPVEEAA AVRIQATFRG YLARKALCAL RGLVKLQALV RGQLVRRQAN ATLRRMQALV DAQSRLRAQR ARMLDADHAT PPAAYQRRSP
201: HHPIPMRRSS YEAMDRSGEE HVKVVEMDAG DPARRGRSSC SAAATESRER RLAEYYHHGG GGQCSPAPFL FAPDLSPQRG DSGHLEDVFA FDPAATARSS
301: PYVAPYDDAA DAYGVVPSYM ANTESSRAKV RSQSAPRQRT DAALERQPSR RRAQQGAPRK MQRSSSHVGV PAAAAYGYPA QPWAGVRLDR SSASLVGSEC
401: GSTSSVLTAA TVGYCRSLVG FEVHRGHY

Best Arabidopsis Sequence Match ( AT4G14750.3 )
(BLAST)

001: MVLGCPKREA VKEFGVQCLK QENVCPIITS RNQTHTHTHI TISSSLTLHN GGLSLQKIIM GKTSKWFRSL LTGKKERTKE HIIQSECVFT SSIPGTPKEK
101: RRWSFRRSSA TGPPPPACAI TLKDSPPPPP PPPPPPPLQQ PFVVEIVDNE DEQIKNVSAE EIEEFAAIKI QACYRSHLAR KALRALKGLV KLQALVRGHL
201: VRKQATATLR CMQALITLQA KAREQRIRMI GGDSTNPRTS IHKTRINNFY HENEENIKIV EMDIQSKMYS PAPSALTEMS PRAYSSHFED CNSFNTAQSS
301: PQCFSRFKEY YNGDTLSSYD YPLFPNYMAN TQSSKAKARS QSAPKQRPPE IYEKQMSGRR RSSMEAPRNN GVPRAVRMQR SSSQLGSNTA KESQQHHHHQ
401: YYPWMAIKLD RSNISLMESE CGSTSTVMTN TNYGRHVDVS PERLLVSQEN MNFEISTYIS

Arabidopsis Description

IQD19IQ-domain 19 [Source:TAIR;Acc:AT4G14750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.