Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G082630.1 | Barley | plastid | 50.53 | 67.86 |
| HORVU6Hr1G091220.1 | Barley | plastid | 54.26 | 52.85 |
| HORVU4Hr1G008170.1 | Barley | cytosol | 51.6 | 52.72 |
| HORVU6Hr1G043090.2 | Barley | cytosol | 53.19 | 27.47 |
| HORVU5Hr1G059910.1 | Barley | mitochondrion, plastid | 58.51 | 19.82 |
| TraesCS5A01G201400.1 | Wheat | mitochondrion | 56.38 | 19.1 |
| TraesCS5D01G207500.1 | Wheat | mitochondrion | 56.38 | 18.86 |
| TraesCS5B01G200100.1 | Wheat | mitochondrion | 55.32 | 18.51 |
| Zm00001d005699_P001 | Maize | mitochondrion | 47.34 | 16.7 |
| Os09t0386200-01 | Rice | plasma membrane | 48.4 | 16.64 |
| Zm00001d020358_P001 | Maize | mitochondrion | 46.81 | 15.69 |
| OQU89450 | Sorghum | mitochondrion | 47.34 | 15.16 |
| HORVU7Hr1G046920.1 | Barley | mitochondrion | 40.96 | 14.26 |
| GSMUA_Achr5P05220_001 | Banana | mitochondrion | 35.11 | 13.61 |
| Bra018108.1-P | Field mustard | cytosol | 23.4 | 13.5 |
| GSMUA_Achr3P06000_001 | Banana | plastid | 36.7 | 13.29 |
| EER92069 | Sorghum | cytosol | 38.83 | 12.7 |
| GSMUA_Achr7P19940_001 | Banana | plastid | 35.11 | 12.48 |
| HORVU7Hr1G039760.2 | Barley | mitochondrion | 32.98 | 11.83 |
| GSMUA_Achr9P14450_001 | Banana | plastid | 28.19 | 11.4 |
| GSMUA_Achr10P... | Banana | cytosol | 27.66 | 11.38 |
| AT5G65200.1 | Thale cress | cytosol, mitochondrion | 32.45 | 10.97 |
| Bra031875.1-P | Field mustard | mitochondrion | 30.32 | 10.44 |
| CDY37807 | Canola | mitochondrion | 30.32 | 10.4 |
| CDY33979 | Canola | mitochondrion | 30.32 | 10.31 |
| KRH63473 | Soybean | cytosol, plastid | 28.19 | 10.1 |
| KRH54443 | Soybean | cytosol, mitochondrion | 26.6 | 9.65 |
| VIT_17s0000g07730.t01 | Wine grape | cytosol, plastid | 26.6 | 9.56 |
| VIT_14s0066g01870.t01 | Wine grape | cytosol, plastid | 27.13 | 9.38 |
| CDY44594 | Canola | cytosol, plastid | 27.13 | 9.29 |
| CDY24151 | Canola | cytosol | 22.87 | 9.09 |
| Bra025605.1-P | Field mustard | cytosol, plastid | 27.13 | 9.07 |
| CDY69575 | Canola | cytosol | 23.4 | 9.02 |
| CDY36926 | Canola | cytosol | 24.47 | 8.95 |
| CDY53109 | Canola | cytosol, plastid | 25.53 | 8.66 |
| PGSC0003DMT400001437 | Potato | mitochondrion | 22.34 | 8.64 |
| CDY30728 | Canola | cytosol | 23.4 | 8.63 |
| Solyc02g087200.1.1 | Tomato | mitochondrion | 21.81 | 8.52 |
| CDY16770 | Canola | cytosol, mitochondrion | 24.47 | 8.24 |
| Bra035890.1-P | Field mustard | mitochondrion, plastid | 24.47 | 8.23 |
| AT5G62560.1 | Thale cress | cytosol | 24.47 | 8.23 |
| AT5G40140.1 | Thale cress | plastid | 23.94 | 8.18 |
| Bra029250.1-P | Field mustard | cytosol | 23.94 | 8.15 |
| KRG93403 | Soybean | cytosol | 24.47 | 8.1 |
| AT3G47820.1 | Thale cress | cytosol | 22.87 | 8.1 |
| PGSC0003DMT400062863 | Potato | cytosol | 22.87 | 8.04 |
| CDX87251 | Canola | mitochondrion | 23.4 | 7.82 |
| Solyc03g113870.1.1 | Tomato | cytosol | 21.81 | 7.77 |
| KRH18582 | Soybean | cytosol | 23.4 | 7.25 |
| HORVU7Hr1G108260.3 | Barley | cytosol, nucleus | 3.19 | 3.47 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G008010.2 | EnsemblPlantsGene:HORVU6Hr1G008010 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF79 | SEG:seg | UniParc:UPI000B478AD8 |
| UniProt:A0A287T8E8 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:14965655..14966988
Molecular Weight (calculated)
20163.4 Da
IEP (calculated)
11.558
GRAVY (calculated)
-0.359
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIYHLSLAA VNQSKVARFP GASKALVSIA CSAAEHTPIR RLALMVICNV GGCLEGRASL MDAGAAAAVS GILLSSDDVA ELEEWCVAAI YALSHGSLRF
101: RGLARGRRGQ GPPPRGRGGD PRRRPAQDGE EDVAHHAGRP GRGGGPDWQQ PGVRRRGRLR REHRVRRVHV VPQKGPCVVM GEKNTTRF
101: RGLARGRRGQ GPPPRGRGGD PRRRPAQDGE EDVAHHAGRP GRGGGPDWQQ PGVRRRGRLR REHRVRRVHV VPQKGPCVVM GEKNTTRF
001: MGKNGRLRWN PFSHRSSSST SSSSRQQQQE QQPPVEFLCP ISKSVMSDPV VVSSGQTFER VCVQVCRDLN FIPKLNDDEE SLPDFSNIIP NLNMKSTIDT
101: WCDTVGVSRP QPPDYSTVER ILRQQMPPPD VEIRVSEQEL LRAVAHRAPM IIHHADSELM GRRDFNNSTT SSDESVIVAH SPFTPLPLTT RPACFSPSPS
201: SSSSEIETLT HHTFFSNSTS TATEEDEVIY NKLKSSEIFD QEQGLIMMRK MTRTNDEARV SLCSPRILSL LKNMIVSRYS LVQTNALASL VNLSLDKKNK
301: LTIVRLGFVP ILIDVLKSGS REAQEHAAGT IFSLSLEDDN KMPIGVLGAL QPLLHALRAA ESDRTRHDSA LALYHLTLNQ TNRSKLVRLG AVPALFSMVR
401: SGESASRALL VICNLACCSE GRSAMLDANA VAILVGKLRE EWTEEPTEAR SSSSARENCV AALFALSHES LRFKGLAKEA RAVEVLKEVE ERGTERAREK
501: AKKILQLMRE RVPEDDEEDG EGSIDWDRVI DSNGSIRSRF RVGGRNRVVT QNSSGF
101: WCDTVGVSRP QPPDYSTVER ILRQQMPPPD VEIRVSEQEL LRAVAHRAPM IIHHADSELM GRRDFNNSTT SSDESVIVAH SPFTPLPLTT RPACFSPSPS
201: SSSSEIETLT HHTFFSNSTS TATEEDEVIY NKLKSSEIFD QEQGLIMMRK MTRTNDEARV SLCSPRILSL LKNMIVSRYS LVQTNALASL VNLSLDKKNK
301: LTIVRLGFVP ILIDVLKSGS REAQEHAAGT IFSLSLEDDN KMPIGVLGAL QPLLHALRAA ESDRTRHDSA LALYHLTLNQ TNRSKLVRLG AVPALFSMVR
401: SGESASRALL VICNLACCSE GRSAMLDANA VAILVGKLRE EWTEEPTEAR SSSSARENCV AALFALSHES LRFKGLAKEA RAVEVLKEVE ERGTERAREK
501: AKKILQLMRE RVPEDDEEDG EGSIDWDRVI DSNGSIRSRF RVGGRNRVVT QNSSGF
Arabidopsis Description
PUB38U-box domain-containing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP6]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.