Factsheet for HORVU7Hr1G108260.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G043090.2	Barley	cytosol	55.49	26.37
HORVU5Hr1G059910.1	Barley	mitochondrion, plastid	63.01	19.64
TraesCS5B01G200100.1	Wheat	mitochondrion	63.01	19.39
TraesCS5D01G207500.1	Wheat	mitochondrion	61.85	19.04
TraesCS5A01G201400.1	Wheat	mitochondrion	60.12	18.74
Zm00001d005699_P001	Maize	mitochondrion	54.34	17.64
Zm00001d020358_P001	Maize	mitochondrion	54.91	16.93
OQU89450	Sorghum	mitochondrion	56.07	16.52
Os09t0386200-01	Rice	plasma membrane	51.45	16.27
EER92069	Sorghum	cytosol	52.02	15.65
Bra018108.1-P	Field mustard	cytosol	28.32	15.03
GSMUA_Achr10P...	Banana	cytosol	38.73	14.66
HORVU7Hr1G046920.1	Barley	mitochondrion	44.51	14.26
HORVU7Hr1G039760.2	Barley	mitochondrion	39.88	13.17
GSMUA_Achr5P05220_001	Banana	mitochondrion	35.84	12.78
GSMUA_Achr7P19940_001	Banana	plastid	38.73	12.67
GSMUA_Achr9P14450_001	Banana	plastid	31.79	11.83
Solyc02g087200.1.1	Tomato	mitochondrion	32.37	11.64
CDY24151	Canola	cytosol	31.79	11.63
GSMUA_Achr3P06000_001	Banana	plastid	34.1	11.37
PGSC0003DMT400001437	Potato	mitochondrion	31.79	11.32
CDY69575	Canola	cytosol	31.79	11.27
CDY30728	Canola	cytosol	32.37	10.98
VIT_14s0066g01870.t01	Wine grape	cytosol, plastid	33.53	10.66
KRG93403	Soybean	cytosol	34.68	10.56
KRH63473	Soybean	cytosol, plastid	31.79	10.48
KRH54443	Soybean	cytosol, mitochondrion	31.21	10.42
Solyc03g113870.1.1	Tomato	cytosol	31.79	10.42
Bra029250.1-P	Field mustard	cytosol	32.95	10.33
VIT_17s0000g07730.t01	Wine grape	cytosol, plastid	31.21	10.32
CDY36926	Canola	cytosol	30.64	10.31
AT5G65200.1	Thale cress	cytosol, mitochondrion	32.37	10.07
CDY16770	Canola	cytosol, mitochondrion	32.37	10.04
Bra035890.1-P	Field mustard	mitochondrion, plastid	32.37	10.02
CDX87251	Canola	mitochondrion	32.37	9.95
PGSC0003DMT400062863	Potato	cytosol	30.64	9.91
KRH18582	Soybean	cytosol	34.68	9.88
AT5G62560.1	Thale cress	cytosol	31.79	9.84
AT5G40140.1	Thale cress	plastid	30.64	9.64
Bra031875.1-P	Field mustard	mitochondrion	30.06	9.52
CDY37807	Canola	mitochondrion	30.06	9.49
AT3G47820.1	Thale cress	cytosol	28.9	9.42
CDY53109	Canola	cytosol, plastid	30.06	9.39
CDY44594	Canola	cytosol, plastid	29.48	9.29
CDY33979	Canola	mitochondrion	28.9	9.04
Bra025605.1-P	Field mustard	cytosol, plastid	28.9	8.9
HORVU4Hr1G082630.1	Barley	plastid	3.47	4.29
HORVU4Hr1G008170.1	Barley	cytosol	4.05	3.8
HORVU6Hr1G008010.2	Barley	plastid	3.47	3.19
HORVU6Hr1G091220.1	Barley	plastid	2.89	2.59

Protein Annotations

EnsemblPlants:HORVU7Hr1G108260.3	EnsemblPlantsGene:HORVU7Hr1G108260	Gene3D:1.25.10.110	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-type_fold
PANTHER:PTHR23315	PANTHER:PTHR23315:SF79	SEG:seg	SUPFAM:SSF48371	UniParc:UPI000B46AC4C	UniProt:A0A287XRI2
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:624868906..624870211

Molecular Weight (calculated)

18686.6 Da

IEP (calculated)

10.589

GRAVY (calculated)

-0.223

Length

173 amino acids

Sequence
(BLAST)

001: AGGAWRRAGD GDGIGPLKKG VQVEYTKRQG LFCKKRKFKD EVVTTVMGED EDGEVAAALA VLRDATRESA ERRLALCTPR LLAALRRVLL IPRHASARVD
101: AMAALVNLSL EPANKVRIVR AGTVPALVEV LRSGGSTPEA CEHAPTRSSA WRSTRRTAPP SACWARCLPC WTS

Best Arabidopsis Sequence Match ( AT5G65200.1 )
(BLAST)

001: MGKNGRLRWN PFSHRSSSST SSSSRQQQQE QQPPVEFLCP ISKSVMSDPV VVSSGQTFER VCVQVCRDLN FIPKLNDDEE SLPDFSNIIP NLNMKSTIDT
101: WCDTVGVSRP QPPDYSTVER ILRQQMPPPD VEIRVSEQEL LRAVAHRAPM IIHHADSELM GRRDFNNSTT SSDESVIVAH SPFTPLPLTT RPACFSPSPS
201: SSSSEIETLT HHTFFSNSTS TATEEDEVIY NKLKSSEIFD QEQGLIMMRK MTRTNDEARV SLCSPRILSL LKNMIVSRYS LVQTNALASL VNLSLDKKNK
301: LTIVRLGFVP ILIDVLKSGS REAQEHAAGT IFSLSLEDDN KMPIGVLGAL QPLLHALRAA ESDRTRHDSA LALYHLTLNQ TNRSKLVRLG AVPALFSMVR
401: SGESASRALL VICNLACCSE GRSAMLDANA VAILVGKLRE EWTEEPTEAR SSSSARENCV AALFALSHES LRFKGLAKEA RAVEVLKEVE ERGTERAREK
501: AKKILQLMRE RVPEDDEEDG EGSIDWDRVI DSNGSIRSRF RVGGRNRVVT QNSSGF

Arabidopsis Description

PUB38U-box domain-containing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.