Factsheet for HORVU6Hr1G091220.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G082630.1	Barley	plastid	50.26	69.29
HORVU6Hr1G008010.2	Barley	plastid	52.85	54.26
HORVU4Hr1G008170.1	Barley	cytosol	51.3	53.8
HORVU6Hr1G043090.2	Barley	cytosol	79.79	42.31
HORVU5Hr1G059910.1	Barley	mitochondrion, plastid	82.9	28.83
TraesCS5A01G201400.1	Wheat	mitochondrion	81.35	28.29
TraesCS5D01G207500.1	Wheat	mitochondrion	79.27	27.22
TraesCS5B01G200100.1	Wheat	mitochondrion	78.76	27.05
Os09t0386200-01	Rice	plasma membrane	67.36	23.77
Zm00001d020358_P001	Maize	mitochondrion	65.28	22.46
Zm00001d005699_P001	Maize	mitochondrion	60.1	21.76
OQU89450	Sorghum	mitochondrion	65.8	21.64
GSMUA_Achr5P05220_001	Banana	mitochondrion	43.01	17.11
HORVU7Hr1G046920.1	Barley	mitochondrion	47.15	16.85
GSMUA_Achr3P06000_001	Banana	plastid	43.52	16.18
EER92069	Sorghum	cytosol	48.19	16.17
GSMUA_Achr10P...	Banana	cytosol	37.31	15.75
Bra018108.1-P	Field mustard	cytosol	24.87	14.72
HORVU7Hr1G039760.2	Barley	mitochondrion	39.38	14.5
GSMUA_Achr7P19940_001	Banana	plastid	39.38	14.37
GSMUA_Achr9P14450_001	Banana	plastid	33.68	13.98
AT5G65200.1	Thale cress	cytosol, mitochondrion	33.68	11.69
VIT_17s0000g07730.t01	Wine grape	cytosol, plastid	30.57	11.28
KRH63473	Soybean	cytosol, plastid	30.57	11.24
Bra031875.1-P	Field mustard	mitochondrion	31.61	11.17
CDY37807	Canola	mitochondrion	31.61	11.13
CDY33979	Canola	mitochondrion	31.61	11.03
Solyc02g087200.1.1	Tomato	mitochondrion	27.46	11.02
KRH54443	Soybean	cytosol, mitochondrion	29.53	11.0
PGSC0003DMT400001437	Potato	mitochondrion	27.46	10.91
CDY24151	Canola	cytosol	26.42	10.78
CDY69575	Canola	cytosol	25.91	10.25
Solyc03g113870.1.1	Tomato	cytosol	27.98	10.23
CDY30728	Canola	cytosol	26.94	10.2
PGSC0003DMT400062863	Potato	cytosol	27.98	10.09
VIT_14s0066g01870.t01	Wine grape	cytosol, plastid	27.46	9.74
KRG93403	Soybean	cytosol	28.5	9.68
CDY44594	Canola	cytosol, plastid	27.46	9.65
Bra029250.1-P	Field mustard	cytosol	27.46	9.6
CDY53109	Canola	cytosol, plastid	27.46	9.57
AT5G40140.1	Thale cress	plastid	26.94	9.45
Bra025605.1-P	Field mustard	cytosol, plastid	27.46	9.43
CDY36926	Canola	cytosol	24.87	9.34
AT5G62560.1	Thale cress	cytosol	26.94	9.3
AT3G47820.1	Thale cress	cytosol	25.39	9.23
CDY16770	Canola	cytosol, mitochondrion	25.91	8.96
Bra035890.1-P	Field mustard	mitochondrion, plastid	25.91	8.94
CDX87251	Canola	mitochondrion	25.39	8.7
KRH18582	Soybean	cytosol	26.42	8.4
HORVU7Hr1G108260.3	Barley	cytosol, nucleus	2.59	2.89

Protein Annotations

EnsemblPlants:HORVU6Hr1G091220.1	EnsemblPlantsGene:HORVU6Hr1G091220	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	PANTHER:PTHR23315	PANTHER:PTHR23315:SF79	SEG:seg	SUPFAM:SSF48371
UniParc:UPI000B471343	UniProt:A0A287V678	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:575044557..575045555

Molecular Weight (calculated)

20687.8 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.056

Length

193 amino acids

Sequence
(BLAST)

001: MAIYHLSLAA VNQSKVARFP GASKALLSVA SSAAEPTPIR RLALMVICNV GGSSEGRASQ MDAGVVAAVS GILLSSHDVA ELEEWCVAAI YALSHDSLRF
101: RSLARAAGAD KALRCVAEEG TPGGVRREMA RKTLRAMRGD LDEEADLTGS SLECGDGDDC GGSIVSDGFM SFQFNYLKDR GFLKRQRWVF RRK

Best Arabidopsis Sequence Match ( AT5G65200.1 )
(BLAST)

001: MGKNGRLRWN PFSHRSSSST SSSSRQQQQE QQPPVEFLCP ISKSVMSDPV VVSSGQTFER VCVQVCRDLN FIPKLNDDEE SLPDFSNIIP NLNMKSTIDT
101: WCDTVGVSRP QPPDYSTVER ILRQQMPPPD VEIRVSEQEL LRAVAHRAPM IIHHADSELM GRRDFNNSTT SSDESVIVAH SPFTPLPLTT RPACFSPSPS
201: SSSSEIETLT HHTFFSNSTS TATEEDEVIY NKLKSSEIFD QEQGLIMMRK MTRTNDEARV SLCSPRILSL LKNMIVSRYS LVQTNALASL VNLSLDKKNK
301: LTIVRLGFVP ILIDVLKSGS REAQEHAAGT IFSLSLEDDN KMPIGVLGAL QPLLHALRAA ESDRTRHDSA LALYHLTLNQ TNRSKLVRLG AVPALFSMVR
401: SGESASRALL VICNLACCSE GRSAMLDANA VAILVGKLRE EWTEEPTEAR SSSSARENCV AALFALSHES LRFKGLAKEA RAVEVLKEVE ERGTERAREK
501: AKKILQLMRE RVPEDDEEDG EGSIDWDRVI DSNGSIRSRF RVGGRNRVVT QNSSGF

Arabidopsis Description

PUB38U-box domain-containing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP6]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.