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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005699_P001 Maize mitochondrion 70.94 74.67
OQU89450 Sorghum mitochondrion 76.29 72.91
HORVU6Hr1G043090.2 Barley cytosol 43.67 67.31
TraesCS5A01G201400.1 Wheat mitochondrion 65.95 66.67
Os09t0386200-01 Rice plasma membrane 64.53 66.18
TraesCS5D01G207500.1 Wheat mitochondrion 66.13 66.01
TraesCS5B01G200100.1 Wheat mitochondrion 65.95 65.84
HORVU5Hr1G059910.1 Barley mitochondrion, plastid 64.88 65.59
HORVU6Hr1G091220.1 Barley plastid 22.46 65.28
HORVU4Hr1G008170.1 Barley cytosol 20.14 61.41
HORVU4Hr1G082630.1 Barley plastid 14.97 60.0
HORVU7Hr1G108260.3 Barley cytosol, nucleus 16.93 54.91
EER92069 Sorghum cytosol 55.97 54.61
GSMUA_Achr5P05220_001 Banana mitochondrion 41.71 48.25
GSMUA_Achr10P... Banana cytosol 38.32 47.05
HORVU6Hr1G008010.2 Barley plastid 15.69 46.81
Zm00001d044773_P001 Maize cytosol 38.32 46.64
GSMUA_Achr7P19940_001 Banana plastid 43.14 45.75
GSMUA_Achr3P06000_001 Banana plastid 42.25 45.66
Zm00001d032264_P001 Maize mitochondrion 46.52 45.55
GSMUA_Achr9P14450_001 Banana plastid 36.72 44.3
CDY24151 Canola cytosol 32.09 38.05
Bra018108.1-P Field mustard cytosol 21.93 37.73
CDY69575 Canola cytosol 32.62 37.5
Solyc02g087200.1.1 Tomato mitochondrion 31.73 37.01
PGSC0003DMT400001437 Potato mitochondrion 31.73 36.63
KRH63473 Soybean cytosol, plastid 34.22 36.57
CDY30728 Canola cytosol 32.98 36.27
VIT_14s0066g01870.t01 Wine grape cytosol, plastid 34.58 35.66
KRH54443 Soybean cytosol, mitochondrion 32.8 35.52
VIT_17s0000g07730.t01 Wine grape cytosol, plastid 32.62 34.99
Bra029250.1-P Field mustard cytosol 33.51 34.06
CDY44594 Canola cytosol, plastid 32.8 33.52
AT3G47820.1 Thale cress cytosol 31.55 33.33
CDY36926 Canola cytosol 30.3 33.07
AT5G40140.1 Thale cress plastid 32.26 32.91
Bra025605.1-P Field mustard cytosol, plastid 32.8 32.74
Solyc03g113870.1.1 Tomato cytosol 30.66 32.58
PGSC0003DMT400062863 Potato cytosol 31.02 32.52
CDY53109 Canola cytosol, plastid 32.09 32.49
CDY16770 Canola cytosol, mitochondrion 32.26 32.44
AT5G65200.1 Thale cress cytosol, mitochondrion 32.09 32.37
Bra031875.1-P Field mustard mitochondrion 31.02 31.87
CDX87251 Canola mitochondrion 31.91 31.79
CDY33979 Canola mitochondrion 31.19 31.65
KRG93403 Soybean cytosol 31.91 31.51
Bra035890.1-P Field mustard mitochondrion, plastid 31.37 31.48
AT5G62560.1 Thale cress cytosol 31.37 31.48
CDY37807 Canola mitochondrion 30.66 31.39
KRH18582 Soybean cytosol 31.73 29.32
Protein Annotations
Gene3D:1.25.10.10EntrezGene:100281075MapMan:19.2.2.1.5.2.1Gene3D:3.30.40.10InterPro:ARM-likeInterPro:ARM-type_fold
InterPro:ArmadilloUniProt:B6SRZ6EMBL:EU955511GO:GO:0003674GO:GO:0003824GO:GO:0004842
GO:GO:0005488GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016567GO:GO:0016740GO:GO:0016874GO:GO:0019538InterPro:IPR000225InterPro:IPR003613
InterPro:IPR011989InterPro:IPR013083ProteinID:ONM54772.1PFAM:PF04564PFscan:PS50176PFscan:PS51698
PANTHER:PTHR23315PANTHER:PTHR23315:SF79SMART:SM00185SMART:SM00504SUPFAM:SSF48371SUPFAM:SSF57850
UniParc:UPI000182BB91InterPro:Ubox_domainEnsemblPlantsGene:Zm00001d020358EnsemblPlants:Zm00001d020358_P001EnsemblPlants:Zm00001d020358_T001InterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
Ubiquitin-protein ligase
Coordinates
chr7:-:108893865..108895550
Molecular Weight (calculated)
57930.9 Da
IEP (calculated)
7.308
GRAVY (calculated)
-0.092
Length
561 amino acids
Sequence
(BLAST)
001: MGAARPRRWK LPFHRTVSAV GGGGGAPCSP SSRSSSSPAR SEAWAAEAVP EEFLCPISGA LMADPVILPS GKTFERACLQ ACAELAFLPP GVEAGDADTV
101: IPNSALKAAI CTWCARSGRE VPAPPSAEAA RQAVQRAMPP AAAKSVRTTT TRRAVVMAAS TSNSSTSSYG SASEITAAED EAKAKEEAPR RRTVKEAEVE
201: PAAAPPADPL EDDVVGKVMD ADDDGVVAAA MGALREATRE GEERRRALCT PRLLGALRRV LLLPRHAAAR VDAVAALVNL SLEPANKVRI VRAGAVPALV
301: EVLRSGASAP EAREHAAGAL FGLALNEDNR AAIGVLGAVP PLLDLLTSPT HAPRARRDAG MALYHLTLAA VNQSKVARFP GAPKALLAVA SGAAEPGPIR
401: RLALMVACNV AACAEGRNAL MDAGGVASVS GILLSPSHDT TNGGGGTADL EEWCLSAMYA MSRGSLRFRG LALASGADRA LRRVVADEGG GVRREIARKT
501: LRAMRSDLDE DGGEYNDLTG SSAECGDGED CGGSIVSDGL MSFRRRQREL GVSSCGNTAE F
Best Arabidopsis Sequence Match ( AT5G62560.1 )
(BLAST)
001: MGGNKQRWFS FHQRSSSATT TTLPQHKHDE TPPEFLCPIT GFLMSDPVVV SSGQTFERLS VQVCRNLGYI PDLLDGTRPD LSTVIPNLAM KSTIFSWCDR
101: QKVDHPRPPD AAYVEGVVRA RMDKDPNPSP GQSPGPGDKD PEPEILPPVE ENSPSDYDAV MEAIRARSKN SMSPTTSLES VTIGQSSYHP VRAVSMFSSS
201: TTSSSSGVFA GADSPFRNAM SFSSTDHSSS PMSPEEEEIF NKLRGTDIFD HEQGLILLRK MTRSSEDLRV SLCTDRILSF LRSLLVSRYN LVQTNAAASV
301: VNLSLEKQNK VKIVRSGFVP LLIDVLKSGT TEAQEHVAGA LFSLALEDEN KMVIGVLGAV EPLLHALRSS ESERARQDAA LALYHLSLIP SNRTRLVRAG
401: AVPTLLSMVR SGDSTSRILL VLCNLAACPD GKGAMLDGNA VAILVGKLRE VGGGDSEAAR ENCVAVLLTL CQGNLRFRGL ASEAGAEEVL MEVEENGNER
501: VKEKASKILL AMRGGGGGES EFGENAEARE WNRMLEATGL SRTQFQGGQN GGFAYSSQF
Arabidopsis Description
PUB41U-box domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUF6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.