Factsheet for Zm00001d044773_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19688	Sorghum	plastid	84.82	72.68
Os06t0238000-00	Rice	plasma membrane	76.36	67.95
TraesCS7D01G196500.1	Wheat	mitochondrion	74.4	66.47
TraesCS7A01G194900.1	Wheat	mitochondrion	72.23	64.53
TraesCS7B01G100600.1	Wheat	mitochondrion	72.67	64.42
HORVU7Hr1G039760.2	Barley	mitochondrion	73.1	64.31
GSMUA_Achr5P05220_001	Banana	mitochondrion	51.84	49.28
GSMUA_Achr3P06000_001	Banana	plastid	54.01	47.98
GSMUA_Achr9P14450_001	Banana	plastid	47.72	47.31
GSMUA_Achr10P...	Banana	cytosol	46.85	47.26
GSMUA_Achr7P19940_001	Banana	plastid	49.67	43.29
Bra018108.1-P	Field mustard	cytosol	29.5	41.72
Zm00001d005699_P001	Maize	mitochondrion	46.64	40.34
Zm00001d020358_P001	Maize	mitochondrion	46.64	38.32
CDY24151	Canola	cytosol	36.01	35.1
CDY69575	Canola	cytosol	37.09	35.04
CDY30728	Canola	cytosol	37.53	33.92
VIT_17s0000g07730.t01	Wine grape	cytosol, plastid	37.74	33.27
Solyc02g087200.1.1	Tomato	mitochondrion	34.71	33.26
PGSC0003DMT400001437	Potato	mitochondrion	34.71	32.92
CDY36926	Canola	cytosol	36.44	32.68
KRH54443	Soybean	cytosol, mitochondrion	36.44	32.43
VIT_14s0066g01870.t01	Wine grape	cytosol, plastid	37.96	32.17
Zm00001d032264_P001	Maize	mitochondrion	39.91	32.11
KRH63473	Soybean	cytosol, plastid	36.44	32.0
Bra029250.1-P	Field mustard	cytosol	37.96	31.7
Bra035890.1-P	Field mustard	mitochondrion, plastid	37.09	30.59
AT3G47820.1	Thale cress	cytosol	35.14	30.51
CDY16770	Canola	cytosol, mitochondrion	36.88	30.47
CDX87251	Canola	mitochondrion	37.09	30.37
AT5G62560.1	Thale cress	cytosol	36.66	30.23
CDY44594	Canola	cytosol, plastid	35.79	30.05
CDY53109	Canola	cytosol, plastid	35.36	29.42
Bra025605.1-P	Field mustard	cytosol, plastid	35.79	29.36
Bra031875.1-P	Field mustard	mitochondrion	34.06	28.75
CDY37807	Canola	mitochondrion	34.06	28.65
Solyc03g113870.1.1	Tomato	cytosol	32.75	28.6
AT5G40140.1	Thale cress	plastid	34.06	28.55
KRG93403	Soybean	cytosol	34.92	28.35
PGSC0003DMT400062863	Potato	cytosol	32.54	28.04
CDY33979	Canola	mitochondrion	33.41	27.85
AT5G65200.1	Thale cress	cytosol, mitochondrion	33.19	27.52
KRH18582	Soybean	cytosol	35.14	26.69

Protein Annotations

Gene3D:1.25.10.10	Gene3D:1.25.10.110	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A1D6NRD5	ProteinID:AQL00863.1
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF98	SMART:SM00185
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0008432A92	InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d044773
EnsemblPlants:Zm00001d044773_P001	EnsemblPlants:Zm00001d044773_T001	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

Putative ARM repeat-containing protein containing family protein

Coordinates

chr9:-:1994310..1995695

Molecular Weight (calculated)

48627.3 Da

IEP (calculated)

8.417

GRAVY (calculated)

-0.138

Length

461 amino acids

Sequence
(BLAST)

001: MADPVVAPPG QTFERACIQA CAALAFSPPT VAVDLSESHS CSSAPLVLIP NVALRNAILN WCDRLALPHP SPMSPDTAHD IVRRLMPQDR QRSSLAQRPQ
101: PQVQQQPSSR QRGDALEEEI MAALGTEGAT PAEQASAMAL LRQATRENRE VRRQLCTPRL LAALRPMLLS ADADVQVNAA AAVVNLSLEP ENKVRIVRSG
201: AVSPLVDVLR GGHTEARDHA AGAMYSLAVE DENRAAIGVL GAIPPLLDLF AGAAAHRARR EAGMALYHIS LSGMNRPKIA RAPGAVRTLL AVAAAEARRD
301: RASDADAAAL RRLAAMILAN LAGCPDGRAA LMDGGAVAAV VRLMRCGSAA PGSTEEEYCI STLYGMSRGS MRFRGLARAA GVEAALQPVA EGGGGVRRDL
401: ARRTLRAMRG EDDEAPAMDS GLLGRQWDDG SVVSEGLVSI RRPPPHRSNH AGPSGSNTTQ F

Best Arabidopsis Sequence Match ( AT5G62560.1 )
(BLAST)

001: MGGNKQRWFS FHQRSSSATT TTLPQHKHDE TPPEFLCPIT GFLMSDPVVV SSGQTFERLS VQVCRNLGYI PDLLDGTRPD LSTVIPNLAM KSTIFSWCDR
101: QKVDHPRPPD AAYVEGVVRA RMDKDPNPSP GQSPGPGDKD PEPEILPPVE ENSPSDYDAV MEAIRARSKN SMSPTTSLES VTIGQSSYHP VRAVSMFSSS
201: TTSSSSGVFA GADSPFRNAM SFSSTDHSSS PMSPEEEEIF NKLRGTDIFD HEQGLILLRK MTRSSEDLRV SLCTDRILSF LRSLLVSRYN LVQTNAAASV
301: VNLSLEKQNK VKIVRSGFVP LLIDVLKSGT TEAQEHVAGA LFSLALEDEN KMVIGVLGAV EPLLHALRSS ESERARQDAA LALYHLSLIP SNRTRLVRAG
401: AVPTLLSMVR SGDSTSRILL VLCNLAACPD GKGAMLDGNA VAILVGKLRE VGGGDSEAAR ENCVAVLLTL CQGNLRFRGL ASEAGAEEVL MEVEENGNER
501: VKEKASKILL AMRGGGGGES EFGENAEARE WNRMLEATGL SRTQFQGGQN GGFAYSSQF

Arabidopsis Description

PUB41U-box domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q0WUF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.