Factsheet for HORVU7Hr1G039760.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G100600.1	Wheat	mitochondrion	90.84	91.54
TraesCS7A01G194900.1	Wheat	mitochondrion	88.36	89.73
TraesCS7D01G196500.1	Wheat	mitochondrion	86.45	87.79
Zm00001d044773_P001	Maize	cytosol	64.31	73.1
Os06t0238000-00	Rice	plasma membrane	71.18	72.01
KXG19688	Sorghum	plastid	70.23	68.4
GSMUA_Achr5P05220_001	Banana	mitochondrion	49.05	52.99
GSMUA_Achr3P06000_001	Banana	plastid	50.76	51.25
GSMUA_Achr9P14450_001	Banana	plastid	44.66	50.32
GSMUA_Achr10P...	Banana	cytosol	41.98	48.14
GSMUA_Achr7P19940_001	Banana	plastid	47.52	47.07
HORVU6Hr1G043090.2	Barley	cytosol	30.73	44.23
HORVU4Hr1G008170.1	Barley	cytosol	15.08	42.93
HORVU5Hr1G059910.1	Barley	mitochondrion, plastid	44.85	42.34
HORVU4Hr1G082630.1	Barley	plastid	11.07	41.43
Bra018108.1-P	Field mustard	cytosol	25.57	41.1
HORVU7Hr1G108260.3	Barley	cytosol, nucleus	13.17	39.88
HORVU6Hr1G091220.1	Barley	plastid	14.5	39.38
CDY69575	Canola	cytosol	36.26	38.93
HORVU7Hr1G046920.1	Barley	mitochondrion	40.08	38.89
CDY24151	Canola	cytosol	34.73	38.48
CDY30728	Canola	cytosol	35.88	36.86
Solyc02g087200.1.1	Tomato	mitochondrion	33.78	36.8
PGSC0003DMT400001437	Potato	mitochondrion	33.97	36.63
VIT_14s0066g01870.t01	Wine grape	cytosol, plastid	37.6	36.21
KRH54443	Soybean	cytosol, mitochondrion	34.73	35.14
VIT_17s0000g07730.t01	Wine grape	cytosol, plastid	34.73	34.8
Bra029250.1-P	Field mustard	cytosol	36.45	34.6
KRH63473	Soybean	cytosol, plastid	34.54	34.48
CDY44594	Canola	cytosol, plastid	36.07	34.43
CDY36926	Canola	cytosol	33.59	34.24
AT3G47820.1	Thale cress	cytosol	33.97	33.52
Bra025605.1-P	Field mustard	cytosol, plastid	35.88	33.45
CDY53109	Canola	cytosol, plastid	35.31	33.39
AT5G40140.1	Thale cress	plastid	34.92	33.27
CDX87251	Canola	mitochondrion	35.69	33.21
HORVU6Hr1G008010.2	Barley	plastid	11.83	32.98
AT5G62560.1	Thale cress	cytosol	34.92	32.74
Bra035890.1-P	Field mustard	mitochondrion, plastid	34.92	32.74
Solyc03g113870.1.1	Tomato	cytosol	32.63	32.39
CDY16770	Canola	cytosol, mitochondrion	34.35	32.26
PGSC0003DMT400062863	Potato	cytosol	32.44	31.78
Bra031875.1-P	Field mustard	mitochondrion	32.82	31.5
CDY37807	Canola	mitochondrion	32.63	31.2
AT5G65200.1	Thale cress	cytosol, mitochondrion	32.63	30.76
CDY33979	Canola	mitochondrion	32.25	30.56
KRG93403	Soybean	cytosol	33.02	30.46
KRH18582	Soybean	cytosol	33.02	28.5

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A287W580	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G039760	EnsemblPlants:HORVU7Hr1G039760.2	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315
PANTHER:PTHR23315:SF98	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000B46154E
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287W580]

Coordinates

chrchr7H:+:105942025..105943737

Molecular Weight (calculated)

54382.0 Da

IEP (calculated)

8.483

GRAVY (calculated)

-0.093

Length

524 amino acids

Sequence
(BLAST)

001: MGTARLRWRP FKSSSPASSA SASSSPSSSF TATVDPPAEF LCPISGTLMA DPVIVPPGQT IERACIQACA ALAFYPPAVA GLPSSPLVLI PNVALRSAIL
101: NWCERLGLPH PSPLSLDTAG DIVRRLMPPR QEQRSQVNHG SAPQAQPQAS SVRTRNRYSV DYSAGDGFVQ EPRQAGGSLE EEVMAVLGAD GASPAEQKAT
201: MASLRQATRE SKEMRTQLCT PRLLAALRPM LLSADAGIQV NAAAAMVNLS LEAENKVRIV RSGAVSPLVD VLRVGHPEAR DHAAGAIYSL AVEDENRAAI
301: GVLGAIPPLL ELFSSGGAGH RARREAGMAL YHVSLAGMNR SKIARTPGVV RTLLATAEAR DRGNDADAAA LRKLSVMVLA NLAGCPEGRA ALMDGGAVAA
401: IVGLMRSGSA APGSAEEEYC ISALYGMSRG SLRFRGLARA AGVEAALMPV AESDGGVGRD MARRTLRAMR GEDDEVALTA SGILGREWDD ASXXXXSEGM
501: VSLRRPPHHR SNYAGPSGSN TTQF

Best Arabidopsis Sequence Match ( AT5G40140.1 )
(BLAST)

001: MEIQRPVINL MVLHSQHDKS DNLSRRESLA GKSKWRTSLS RSSSSSSSNN NSPTKTEIPA EFLCPISGSL MADPIIVSSG HSYERACVIA CKTLGFTPTP
101: PPDFSTVIPN LALKSAIHSW CERRCFPPPK PLNSAAAEKL ILALMEKKPQ RRKVSVSEKE LIQAIRDKPS VRLNHAATEL DRRPNYFNSS SDESIASSSR
201: TLQLTTKPSC FSSPSSGEIE SLEPNLTPEE EALLTKLKSN RISEIEEALI SIRRITRIDE SSRISLCTTR VISALKSLIV SRYATVQVNV TAVLVNLSLE
301: KSNKVKIVRS GIVPPLIDVL KCGSVEAQEH SAGVIFSLAL EDENKTAIGV LGGLEPLLHL IRVGTELTRH DSALALYHLS LVQSNRGKLV KLGAVQMLLG
401: MVSLGQMIGR VLLILCNMAS CPVSRPALLD SGGVECMVGV LRRDREVNES TRESCVAVLY GLSHDGGLRF KGLAMAANAV EELVKVERSG RERAKQKARR
501: VLEVLRAKIE DDDLVENEEI DWEELLNSGD VSRSRCRLGG EKSCVNSAEF

Arabidopsis Description

PUB40U-box domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL17]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.