Factsheet for HORVU6Hr1G043090.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G091220.1	Barley	plastid	42.31	79.79
HORVU4Hr1G008170.1	Barley	cytosol	35.44	70.11
HORVU4Hr1G082630.1	Barley	plastid	25.27	65.71
HORVU7Hr1G108260.3	Barley	cytosol, nucleus	26.37	55.49
HORVU6Hr1G008010.2	Barley	plastid	27.47	53.19
HORVU5Hr1G059910.1	Barley	mitochondrion, plastid	80.49	52.79
TraesCS5D01G207500.1	Wheat	mitochondrion	79.67	51.6
TraesCS5A01G201400.1	Wheat	mitochondrion	78.57	51.53
TraesCS5B01G200100.1	Wheat	mitochondrion	78.3	50.71
Os09t0386200-01	Rice	plasma membrane	68.13	45.34
Zm00001d020358_P001	Maize	mitochondrion	67.31	43.67
Zm00001d005699_P001	Maize	mitochondrion	63.19	43.15
OQU89450	Sorghum	mitochondrion	66.76	41.4
Bra018108.1-P	Field mustard	cytosol	31.87	35.58
EER92069	Sorghum	cytosol	54.95	34.78
GSMUA_Achr10P...	Banana	cytosol	43.41	34.57
HORVU7Hr1G046920.1	Barley	mitochondrion	50.82	34.26
GSMUA_Achr5P05220_001	Banana	mitochondrion	45.6	34.23
GSMUA_Achr3P06000_001	Banana	plastid	47.25	33.14
GSMUA_Achr9P14450_001	Banana	plastid	40.38	31.61
HORVU7Hr1G039760.2	Barley	mitochondrion	44.23	30.73
GSMUA_Achr7P19940_001	Banana	plastid	43.68	30.06
Solyc02g087200.1.1	Tomato	mitochondrion	34.07	25.78
CDY24151	Canola	cytosol	33.24	25.58
PGSC0003DMT400001437	Potato	mitochondrion	34.07	25.51
CDY69575	Canola	cytosol	33.79	25.2
CDY30728	Canola	cytosol	34.07	24.31
KRH63473	Soybean	cytosol, plastid	34.89	24.19
KRH54443	Soybean	cytosol, mitochondrion	34.07	23.94
VIT_14s0066g01870.t01	Wine grape	cytosol, plastid	35.71	23.9
VIT_17s0000g07730.t01	Wine grape	cytosol, plastid	33.52	23.33
CDY36926	Canola	cytosol	32.69	23.15
AT5G65200.1	Thale cress	cytosol, mitochondrion	35.16	23.02
Bra029250.1-P	Field mustard	cytosol	34.34	22.64
CDY44594	Canola	cytosol, plastid	34.07	22.59
AT5G40140.1	Thale cress	plastid	34.07	22.55
Bra031875.1-P	Field mustard	mitochondrion	33.79	22.53
CDY37807	Canola	mitochondrion	33.79	22.45
CDY53109	Canola	cytosol, plastid	34.07	22.38
AT5G62560.1	Thale cress	cytosol	34.34	22.36
Solyc03g113870.1.1	Tomato	cytosol	32.42	22.35
CDY33979	Canola	mitochondrion	33.79	22.24
CDY16770	Canola	cytosol, mitochondrion	34.07	22.22
Bra035890.1-P	Field mustard	mitochondrion, plastid	34.07	22.18
PGSC0003DMT400062863	Potato	cytosol	32.42	22.06
Bra025605.1-P	Field mustard	cytosol, plastid	33.79	21.89
CDX87251	Canola	mitochondrion	33.79	21.85
KRG93403	Soybean	cytosol	34.07	21.83
AT3G47820.1	Thale cress	cytosol	31.59	21.66
KRH18582	Soybean	cytosol	33.52	20.1

Protein Annotations

Gene3D:1.25.10.10	Gene3D:1.25.10.110	MapMan:19.2.2.1.5.2.1	UniProt:A0A287U225	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU6Hr1G043090	EnsemblPlants:HORVU6Hr1G043090.2
InterPro:IPR000225	InterPro:IPR011989	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF79	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI000B465A0C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:243600052..243601235

Molecular Weight (calculated)

38783.1 Da

IEP (calculated)

8.271

GRAVY (calculated)

0.178

Length

364 amino acids

Sequence
(BLAST)

001: GIMRAEAIAL SCVFCQPRYR DPLEDEVVAT VMDADEYGEV AVALAVLRDA TLESAERRLA LCTPRLLATL RHVLLIPRHA SARVDATAAL VNLSLEPANK
101: VRIVRAGAVP ALVEVLRSGS SAPKACEHAT GELFGLALNK ENRAAIGVLG AVPSLLDLLT SPAHHPRVRR DAGMAIYHLS LAAVNQSKVA RFLGASKALL
201: SVVSSAAEPT PIHRLALMVI CNVGGFSEGR ASLMDAGAIA AVSGILLSSH DVAELEEWCV AAIYTLSRDS LQFRGLARAA GADKALCRVA EKGTPGGIRR
301: EMARKTLCAM RGDLDEEADL TGRSLECGDG DDCSGSIVSD GFTSFRFNYL KVRGFLKKRL RRVF

Best Arabidopsis Sequence Match ( AT5G65200.1 )
(BLAST)

001: MGKNGRLRWN PFSHRSSSST SSSSRQQQQE QQPPVEFLCP ISKSVMSDPV VVSSGQTFER VCVQVCRDLN FIPKLNDDEE SLPDFSNIIP NLNMKSTIDT
101: WCDTVGVSRP QPPDYSTVER ILRQQMPPPD VEIRVSEQEL LRAVAHRAPM IIHHADSELM GRRDFNNSTT SSDESVIVAH SPFTPLPLTT RPACFSPSPS
201: SSSSEIETLT HHTFFSNSTS TATEEDEVIY NKLKSSEIFD QEQGLIMMRK MTRTNDEARV SLCSPRILSL LKNMIVSRYS LVQTNALASL VNLSLDKKNK
301: LTIVRLGFVP ILIDVLKSGS REAQEHAAGT IFSLSLEDDN KMPIGVLGAL QPLLHALRAA ESDRTRHDSA LALYHLTLNQ TNRSKLVRLG AVPALFSMVR
401: SGESASRALL VICNLACCSE GRSAMLDANA VAILVGKLRE EWTEEPTEAR SSSSARENCV AALFALSHES LRFKGLAKEA RAVEVLKEVE ERGTERAREK
501: AKKILQLMRE RVPEDDEEDG EGSIDWDRVI DSNGSIRSRF RVGGRNRVVT QNSSGF

Arabidopsis Description

PUB38U-box domain-containing protein 38 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJP6]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.