Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G096140.2 | Barley | cytosol | 60.46 | 98.93 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 88.07 | 71.01 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 88.56 | 70.76 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 87.75 | 70.56 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 60.13 | 67.15 |
| KXG26898 | Sorghum | cytosol | 62.25 | 48.05 |
| Zm00001d026130_P001 | Maize | nucleus | 60.29 | 46.77 |
| Zm00001d002669_P002 | Maize | cytosol | 60.13 | 46.64 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 52.61 | 42.37 |
| GSMUA_Achr11P... | Banana | mitochondrion | 37.58 | 34.23 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 34.15 | 31.71 |
| CDX75484 | Canola | cytosol, plastid | 34.64 | 30.42 |
| CDX76322 | Canola | cytosol | 34.15 | 29.56 |
| CDY17530 | Canola | cytosol | 33.66 | 29.01 |
| AT2G17110.1 | Thale cress | nucleus | 34.15 | 28.51 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 30.39 | 28.4 |
| CDX88008 | Canola | nucleus | 33.01 | 28.25 |
| Bra009665.1-P | Field mustard | cytosol | 32.52 | 28.15 |
| Bra020807.1-P | Field mustard | nucleus | 34.64 | 27.79 |
| CDY07877 | Canola | cytosol | 32.19 | 27.55 |
| CDX69122 | Canola | nucleus | 33.17 | 27.03 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 34.8 | 26.23 |
| Bra011597.1-P | Field mustard | nucleus | 35.13 | 25.72 |
| AT4G35240.1 | Thale cress | nucleus | 36.11 | 25.55 |
| KRH74089 | Soybean | cytosol | 32.52 | 25.42 |
| Solyc10g074470.1.1 | Tomato | cytosol | 33.01 | 25.16 |
| KRH14028 | Soybean | cytosol | 30.07 | 25.1 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 32.68 | 24.78 |
| Solyc01g112050.2.1 | Tomato | nucleus | 35.13 | 24.16 |
| PGSC0003DMT400048013 | Potato | nucleus | 34.64 | 23.22 |
| KRH51633 | Soybean | cytosol | 24.84 | 22.89 |
| KRH60958 | Soybean | cytosol | 24.67 | 22.81 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 27.12 | 22.37 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 35.13 | 22.21 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 24.18 | 21.3 |
| AT1G20530.1 | Thale cress | cytosol | 20.42 | 20.36 |
| CDY31475 | Canola | nucleus | 19.44 | 19.77 |
| HORVU5Hr1G084580.2 | Barley | cytosol | 21.57 | 18.11 |
| HORVU5Hr1G084030.15 | Barley | nucleus | 17.81 | 16.08 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 11.11 | 15.38 |
| HORVU6Hr1G062350.2 | Barley | plastid | 13.73 | 14.71 |
| HORVU7Hr1G018230.3 | Barley | nucleus | 17.65 | 14.63 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 14.87 | 13.07 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 17.81 | 12.96 |
| HORVU5Hr1G058240.4 | Barley | nucleus | 14.87 | 12.84 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 16.01 | 11.79 |
| CDY29526 | Canola | peroxisome | 19.93 | 10.62 |
| Bra025823.1-P | Field mustard | peroxisome | 19.77 | 10.54 |
| HORVU3Hr1G042920.6 | Barley | cytosol, nucleus | 13.73 | 9.57 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G096180.1 | EnsemblPlantsGene:HORVU2Hr1G096180 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF20 |
| PFAM:PF04782 | SEG:seg | UniParc:UPI000B464AAB | UniProt:A0A287J1J1 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr2H:-:673207551..673210809
Molecular Weight (calculated)
66767.6 Da
IEP (calculated)
7.805
GRAVY (calculated)
-0.414
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXAS LVGSEMCIRD RYYAYGGEPA AAVQPPPPPP QRAAAPAPLP PPRESSSWDF LNVFENYGDS YDSCYYYNPT TTTTAATAAA
101: AAYTPSRSSR EVREEEGIPE LEEEGIPELE EDDEETVVVK EMASEYSTVG SRRGMFGAVN NIPEVDNRRN AQRRRPAYRN VAPLTREPPA QGVVGNAVDA
201: ATAVKTQLVR VAEAARELAP LLEVGRPSYQ GRHSVYHAAS SRMMSAISVP HLGCKDEDML GMVVGEEGKV VGSWSLSLTL EKLYFWERKL YGEVKAEEKM
301: RLRLAKNSKR LKLLDQRGAE AHKVDATRNL LRKLSTKIRI AVRVIAKVSR KINKVRDEEL VPQVNTLIQG FAKMWQDKLH SYQIQLQVIS EAKNMALVIS
401: GGNVRDLATE LELELIKWII NFSSWVSAHR NFVKSLNGWL ALCLNYEPQE APTYSPGRIG APVIFVICNK WSQAMDRISE KDVINTMQAL VSSVRHLWEQ
501: QNLDQSERIV AVREREKWIK MLERKAVEIN KDADELNRKL ALVPGQQQSF QRCPTIRTYE AHCIEASSVH VNLRLVLEAL ESFASSSLEA FQEIPRLDEE
601: VTRSSRGSSR VR
101: AAYTPSRSSR EVREEEGIPE LEEEGIPELE EDDEETVVVK EMASEYSTVG SRRGMFGAVN NIPEVDNRRN AQRRRPAYRN VAPLTREPPA QGVVGNAVDA
201: ATAVKTQLVR VAEAARELAP LLEVGRPSYQ GRHSVYHAAS SRMMSAISVP HLGCKDEDML GMVVGEEGKV VGSWSLSLTL EKLYFWERKL YGEVKAEEKM
301: RLRLAKNSKR LKLLDQRGAE AHKVDATRNL LRKLSTKIRI AVRVIAKVSR KINKVRDEEL VPQVNTLIQG FAKMWQDKLH SYQIQLQVIS EAKNMALVIS
401: GGNVRDLATE LELELIKWII NFSSWVSAHR NFVKSLNGWL ALCLNYEPQE APTYSPGRIG APVIFVICNK WSQAMDRISE KDVINTMQAL VSSVRHLWEQ
501: QNLDQSERIV AVREREKWIK MLERKAVEIN KDADELNRKL ALVPGQQQSF QRCPTIRTYE AHCIEASSVH VNLRLVLEAL ESFASSSLEA FQEIPRLDEE
601: VTRSSRGSSR VR
001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.