Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76322 | Canola | cytosol | 92.54 | 92.93 |
| CDX75484 | Canola | cytosol, plastid | 72.82 | 74.17 |
| CDX69122 | Canola | nucleus | 78.45 | 74.17 |
| AT4G35240.1 | Thale cress | nucleus | 83.94 | 68.9 |
| CDX88008 | Canola | nucleus | 63.66 | 63.22 |
| CDY07877 | Canola | cytosol | 63.52 | 63.08 |
| KRH14028 | Soybean | cytosol | 54.65 | 52.93 |
| KRH74089 | Soybean | cytosol | 57.46 | 52.11 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 54.37 | 47.83 |
| Solyc10g074470.1.1 | Tomato | cytosol | 54.08 | 47.82 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 53.66 | 46.92 |
| Solyc01g112050.2.1 | Tomato | nucleus | 55.21 | 44.04 |
| Os02t0669900-01 | Rice | cytosol | 25.92 | 43.09 |
| PGSC0003DMT400048013 | Potato | nucleus | 55.21 | 42.94 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 38.73 | 39.06 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 20.42 | 38.77 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 37.89 | 38.43 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 36.76 | 38.38 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 29.58 | 38.32 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.35 | 37.35 |
| OQU85656 | Sorghum | cytosol | 38.45 | 35.64 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 32.25 | 34.96 |
| Zm00001d017553_P001 | Maize | cytosol | 37.04 | 34.93 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 32.25 | 34.75 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 36.76 | 34.21 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 36.48 | 34.08 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 36.62 | 34.08 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 36.48 | 33.99 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 29.01 | 33.66 |
| Os08t0551200-00 | Rice | cytosol | 37.89 | 33.21 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 35.49 | 33.2 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 37.61 | 32.96 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 35.21 | 32.85 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 35.07 | 32.51 |
| Os09t0547300-01 | Rice | nucleus | 41.97 | 32.43 |
| KXG26898 | Sorghum | cytosol | 36.2 | 32.41 |
| EER97130 | Sorghum | nucleus | 41.41 | 32.2 |
| Zm00001d002669_P002 | Maize | cytosol | 35.77 | 32.19 |
| Zm00001d026130_P001 | Maize | nucleus | 35.35 | 31.81 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 35.63 | 31.7 |
| Zm00001d006286_P001 | Maize | nucleus | 40.7 | 31.62 |
| Zm00001d021452_P001 | Maize | nucleus | 41.55 | 31.35 |
| CDY31475 | Canola | nucleus | 26.2 | 30.9 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 41.55 | 30.73 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 41.41 | 30.66 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 41.55 | 30.6 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 41.55 | 30.48 |
| CDX88372 | Canola | nucleus | 34.65 | 29.78 |
| CDY28161 | Canola | nucleus | 8.59 | 29.76 |
| CDY41788 | Canola | nucleus | 34.93 | 29.11 |
| CDY08177 | Canola | nucleus | 36.2 | 28.84 |
| CDY04672 | Canola | nucleus | 35.35 | 28.78 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 36.9 | 27.93 |
| CDY28162 | Canola | cytosol | 14.79 | 25.99 |
| CDY66508 | Canola | cytosol, nucleus | 15.07 | 25.3 |
| CDX68628 | Canola | nucleus | 23.66 | 24.85 |
| CDY42005 | Canola | nucleus | 21.13 | 24.51 |
| CDX69386 | Canola | nucleus | 20.7 | 24.34 |
| CDY42454 | Canola | cytosol | 23.66 | 23.97 |
| CDY18335 | Canola | cytosol | 23.66 | 23.76 |
| CDX87516 | Canola | nucleus | 14.93 | 23.56 |
| CDX77992 | Canola | nucleus | 20.7 | 23.37 |
| CDX82615 | Canola | nucleus | 24.65 | 23.21 |
| CDY39136 | Canola | nucleus | 24.51 | 23.11 |
| CDX73734 | Canola | nucleus | 20.7 | 22.97 |
| CDX87081 | Canola | nucleus | 17.04 | 22.66 |
| CDY04477 | Canola | nucleus | 21.55 | 21.28 |
| CDX83412 | Canola | nucleus | 19.86 | 20.95 |
| CDX71474 | Canola | nucleus | 20.99 | 20.72 |
| CDX95620 | Canola | nucleus | 19.3 | 19.71 |
| CDY56992 | Canola | nucleus | 19.86 | 19.39 |
| CDY42691 | Canola | nucleus | 19.3 | 18.95 |
| CDX80528 | Canola | nucleus | 19.44 | 18.83 |
| CDX84637 | Canola | cytosol | 17.61 | 18.63 |
| CDX88193 | Canola | nucleus | 19.3 | 18.59 |
| CDY41178 | Canola | nucleus | 18.87 | 18.59 |
| CDX71821 | Canola | nucleus | 18.45 | 18.45 |
| CDX79570 | Canola | cytosol | 17.32 | 17.85 |
| CDY61085 | Canola | nucleus | 18.45 | 17.56 |
| CDY52975 | Canola | nucleus | 18.45 | 17.54 |
| CDY29526 | Canola | peroxisome | 26.2 | 16.19 |
Protein Annotations
| EnsemblPlants:CDY17530 | EnsemblPlantsGene:GSBRNA2T00095747001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY17530 | ProteinID:CDY17530.1 | SEG:seg |
| UniParc:UPI0004EE8401 | UniProt:A0A078FSQ5 | MapMan:35.1 | : | : | : |
Description
BnaC03g65330DBnaC03g65330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSQ5]
Coordinates
chrLK032074:-:665027..668129
Molecular Weight (calculated)
79967.0 Da
IEP (calculated)
5.595
GRAVY (calculated)
-0.716
Length
710 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCTSSKLDD LPAVALCRER CNFLEAAIQQ RYHLAESHVA YTHSLKGIGH SLHLFINHHH RFFDSDSEDD DEEFHLDSDH HHHLGNFETG PYMGAQPGYT
101: RYPNPEMMGH HLPPTPYMHM NYMKNSSMPP SVIYEQRPSS PQKVYIGESS SSSTYPYNSG PGPGPGYYGS STDAPASKPP PPPPPPSPPR SNGWDFLNPF
201: DTYYPSYTPS RDSRELREEE GIPELEEDDD SQYEAVKEVH GGDNQPTPAV VYREESDSPS PSPRLVSVEK KGVEYEVHVV EKTVVEDGGN ESNATATRGG
301: GGGGGPRAVP EVAKEIENQF LKAAESGSEI AKLLEVGKRP YGRKHASSQL LHGVTPSVAE PPTYADIEEE LASRSRNLSS TLHKLHLWEK KLYREVKAEE
401: KLRVAHEKKV RKLKRLDERG AEANKVDTTR KLVRDMNTKI RIAIQVVDKI SVTINKIRDE DLWPQLNALI QGLTRMWKEM LECHQIQCQA IKEARGLGSI
501: RASKKLGDEH LEATSLLGHE LINWIMGFSS WVNSQKGYVR ELNKWLMKCL LYEPEETADG IAPFSPGRLG APPIFVICNQ WSQALDRISE REVIEAMRGF
601: TTSVLQLWEQ DRLETTVMGQ EKVRNMDREG QRIHREIQAL EKKMVLVAPG DGLLVSGNVV YQSDTSNDSL QGSLQRIFEA MERFTDECMR AYDDLLVRAE
701: EETAPRESEE
101: RYPNPEMMGH HLPPTPYMHM NYMKNSSMPP SVIYEQRPSS PQKVYIGESS SSSTYPYNSG PGPGPGYYGS STDAPASKPP PPPPPPSPPR SNGWDFLNPF
201: DTYYPSYTPS RDSRELREEE GIPELEEDDD SQYEAVKEVH GGDNQPTPAV VYREESDSPS PSPRLVSVEK KGVEYEVHVV EKTVVEDGGN ESNATATRGG
301: GGGGGPRAVP EVAKEIENQF LKAAESGSEI AKLLEVGKRP YGRKHASSQL LHGVTPSVAE PPTYADIEEE LASRSRNLSS TLHKLHLWEK KLYREVKAEE
401: KLRVAHEKKV RKLKRLDERG AEANKVDTTR KLVRDMNTKI RIAIQVVDKI SVTINKIRDE DLWPQLNALI QGLTRMWKEM LECHQIQCQA IKEARGLGSI
501: RASKKLGDEH LEATSLLGHE LINWIMGFSS WVNSQKGYVR ELNKWLMKCL LYEPEETADG IAPFSPGRLG APPIFVICNQ WSQALDRISE REVIEAMRGF
601: TTSVLQLWEQ DRLETTVMGQ EKVRNMDREG QRIHREIQAL EKKMVLVAPG DGLLVSGNVV YQSDTSNDSL QGSLQRIFEA MERFTDECMR AYDDLLVRAE
701: EETAPRESEE
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEEILGF ARLRLGQKAP FRMMI
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEEILGF ARLRLGQKAP FRMMI
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.