Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08177 | Canola | nucleus | 96.67 | 94.61 |
| Bra017947.1-P | Field mustard | nucleus | 97.25 | 92.48 |
| AT1G21740.1 | Thale cress | cytosol | 85.89 | 78.59 |
| CDY41788 | Canola | nucleus | 62.04 | 63.5 |
| CDX88372 | Canola | nucleus | 59.4 | 62.71 |
| PGSC0003DMT400045246 | Potato | mitochondrion | 18.23 | 60.92 |
| CDX87516 | Canola | nucleus | 29.24 | 56.67 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 48.74 | 54.49 |
| KRH64648 | Soybean | cytosol | 50.23 | 52.33 |
| KRH53256 | Soybean | cytosol | 50.0 | 51.78 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 36.01 | 45.77 |
| Solyc06g060270.2.1 | Tomato | nucleus | 48.51 | 41.72 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 36.35 | 40.54 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 34.75 | 36.73 |
| CDX76322 | Canola | cytosol | 28.78 | 35.5 |
| CDY17530 | Canola | cytosol | 28.78 | 35.35 |
| CDX88008 | Canola | nucleus | 28.78 | 35.1 |
| CDY07877 | Canola | cytosol | 28.44 | 34.69 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 35.44 | 34.64 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 35.55 | 34.52 |
| TraesCS1B01G275500.1 | Wheat | nucleus | 34.86 | 34.12 |
| EES19545 | Sorghum | nucleus | 34.98 | 33.81 |
| Os05t0425000-00 | Rice | nucleus | 34.17 | 33.67 |
| CDX69122 | Canola | nucleus | 28.67 | 33.29 |
| Zm00001d038223_P001 | Maize | cytosol | 34.52 | 33.19 |
| CDX75484 | Canola | cytosol, plastid | 26.38 | 33.0 |
| Os01t0960200-00 | Rice | nucleus | 9.86 | 32.09 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 25.23 | 29.73 |
| CDY42454 | Canola | cytosol | 23.85 | 29.67 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 23.51 | 29.5 |
| CDY18335 | Canola | cytosol | 23.85 | 29.42 |
| TraesCS3D01G509700.1 | Wheat | plastid | 30.73 | 29.13 |
| Zm00001d011823_P002 | Maize | plastid | 29.93 | 29.06 |
| CDY28162 | Canola | cytosol | 13.42 | 28.96 |
| TraesCS3B01G566500.1 | Wheat | plastid | 31.08 | 28.86 |
| KXG34164 | Sorghum | plastid | 30.5 | 28.66 |
| CDY31475 | Canola | nucleus | 19.72 | 28.57 |
| CDY28161 | Canola | nucleus | 6.65 | 28.29 |
| CDY66508 | Canola | cytosol, nucleus | 13.07 | 26.95 |
| CDY42005 | Canola | nucleus | 18.12 | 25.82 |
| CDX69386 | Canola | nucleus | 17.78 | 25.66 |
| CDX68628 | Canola | nucleus | 19.84 | 25.59 |
| CDY39136 | Canola | nucleus | 20.87 | 24.17 |
| CDX82615 | Canola | nucleus | 20.76 | 24.01 |
| CDX77992 | Canola | nucleus | 16.86 | 23.37 |
| CDX73734 | Canola | nucleus | 17.09 | 23.28 |
| CDX87081 | Canola | nucleus | 14.22 | 23.22 |
| CDY04477 | Canola | nucleus | 18.23 | 22.11 |
| CDX71474 | Canola | nucleus | 18.0 | 21.84 |
| CDX84637 | Canola | cytosol | 16.63 | 21.61 |
| CDX79570 | Canola | cytosol | 16.86 | 21.34 |
| CDX83412 | Canola | nucleus | 15.94 | 20.65 |
| CDX80528 | Canola | nucleus | 17.09 | 20.33 |
| CDX88193 | Canola | nucleus | 17.09 | 20.22 |
| CDX71821 | Canola | nucleus | 16.17 | 19.86 |
| CDY41178 | Canola | nucleus | 15.94 | 19.28 |
| CDY42691 | Canola | nucleus | 15.94 | 19.23 |
| CDX95620 | Canola | nucleus | 15.14 | 18.99 |
| CDY56992 | Canola | nucleus | 15.6 | 18.71 |
| CDY61085 | Canola | nucleus | 15.94 | 18.63 |
| CDY52975 | Canola | nucleus | 15.94 | 18.61 |
| CDY29526 | Canola | peroxisome | 19.95 | 15.14 |
Protein Annotations
| EnsemblPlants:CDY04672 | EnsemblPlantsGene:GSBRNA2T00119274001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY04672 | ProteinID:CDY04672.1 | SEG:seg |
| UniParc:UPI0004EF16D4 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g17100D
Coordinates
chrLK031956:+:734894..737929
Molecular Weight (calculated)
97465.9 Da
IEP (calculated)
6.062
GRAVY (calculated)
-0.707
Length
872 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGGSKVDD QPLVILCRER KELIKAASYH RSALAAAHLA YFQSLCDVGE SIKRFVDEEL VLSAGSNNNS SPPDSPVLTL PSDEGKKKHK ISSSSTSVSH
101: SVVEEDDGEG SHLHLPSGSE FDSGSESGSD DSLGHHIHIE SSPKVLKEQP LPETYPPGYP PSYPPGFSSG YQYPGQGWGF MGENPNPYQG MYFMKKSAPA
201: SRPVVFQPEN HRVENGQWPQ ENGYGYYGYP EQQRRAAPPS PARPPPSPPT VSTWDFLNVF DTYDYNRTGA GESYPAAGGV KSSSSSLDSR EVREREGIPE
301: LEDETEQETL KQSKRKSVEK MKEHIPENEP SHWSQLDERK IKKRGGDSGE GTSRDVPMVE SSFSSKTVSS FTSSEEGSEF HHVNEGEESS SSHGHEAVAR
401: KSVGEVEEEY VRKKGVSFEL EENIPATSFD VESSKISSLS ALSVHATRDL REVVKEIKSE FEAASSHGKE VAVLLEVSKL PYQQKSSGLK VIFSRIMSSR
501: SQPQPSIRLT SRILKIAKSY NVQDVPEGFT ANLSSTLEKL YAWEKKLYKE VKDEEKLRVI YEEKCKTLKK LDSLGAESSK IDTTRAAIRK LLTKLDVCIR
601: SVDSISNRIH KLRDEELQPQ LTQLIHGLIR MWRLMLKCHQ KQFQAIMESK VRSLRANTGL QRDSGLKAIL DLEMELREWC ISFNDWVNTQ KLYVESLNGW
701: LSRCLHYEPE STEDGVAPFS PGRVGAPHVF VICKDWQEAM ERISGDNVTN AMEGFAASLH ELWERQDEEQ RQRVKAEYQL QDGGASSERS VVLSESGRIS
801: ALDDLKVDLD SMRKKLEEER ARHKETIKLV NNAASSSLQS GLVPIFEALG NFTSQVVKAH EHVRFQQPQS SS
101: SVVEEDDGEG SHLHLPSGSE FDSGSESGSD DSLGHHIHIE SSPKVLKEQP LPETYPPGYP PSYPPGFSSG YQYPGQGWGF MGENPNPYQG MYFMKKSAPA
201: SRPVVFQPEN HRVENGQWPQ ENGYGYYGYP EQQRRAAPPS PARPPPSPPT VSTWDFLNVF DTYDYNRTGA GESYPAAGGV KSSSSSLDSR EVREREGIPE
301: LEDETEQETL KQSKRKSVEK MKEHIPENEP SHWSQLDERK IKKRGGDSGE GTSRDVPMVE SSFSSKTVSS FTSSEEGSEF HHVNEGEESS SSHGHEAVAR
401: KSVGEVEEEY VRKKGVSFEL EENIPATSFD VESSKISSLS ALSVHATRDL REVVKEIKSE FEAASSHGKE VAVLLEVSKL PYQQKSSGLK VIFSRIMSSR
501: SQPQPSIRLT SRILKIAKSY NVQDVPEGFT ANLSSTLEKL YAWEKKLYKE VKDEEKLRVI YEEKCKTLKK LDSLGAESSK IDTTRAAIRK LLTKLDVCIR
601: SVDSISNRIH KLRDEELQPQ LTQLIHGLIR MWRLMLKCHQ KQFQAIMESK VRSLRANTGL QRDSGLKAIL DLEMELREWC ISFNDWVNTQ KLYVESLNGW
701: LSRCLHYEPE STEDGVAPFS PGRVGAPHVF VICKDWQEAM ERISGDNVTN AMEGFAASLH ELWERQDEEQ RQRVKAEYQL QDGGASSERS VVLSESGRIS
801: ALDDLKVDLD SMRKKLEEER ARHKETIKLV NNAASSSLQS GLVPIFEALG NFTSQVVKAH EHVRFQQPQS SS
001: MGCGGSKVDD QPLVILCRER KQLIKAASHH RCALAAAHLS YFQSLCDVGD SIKRFVDEEL VLVGTSSSSS PDSPVLTLPS DEGKPHKHKI SSSSTSVSHS
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
101: VIEDDDEGEG EDQHLHLSSG SELDSGSESG SDDSLGHIHI ETSPKVKEKE TRLPENYQPG YQSGYQSGYQ PGFTPGYQYQ PGYSAGYQYP VEGWGFMGEN
201: PNLNPYPNPN QNPGMYFMKK SVQPSRPVVF QPENHRVENG QWLPENGVGY SNYYPGNANT GYFGYPEQRR EPPSPVRPTP APPSPPRISS WDFLNVFDTY
301: DYNRAGGGES SGAGAGFFPA MGGGKSNSSS PDSREVRERE GIPELEEETE QEVIFGQTFK HMKRKGIEKV KEQHRQENEI HERKIKKRGD SGEGTSRAVP
401: VVERATESSF GSKTVSSFSS SEEESEFHHV NDGEGKSSSN DLGGHETVAT KSVGEVEEEY VRKKGVSFEL DENVTTSFDV ESSKISSLSA LSVHATRDLR
501: EVVKEIKSEF EVASSHGKEV AVLLEVSKLP YQQKSSGLKV IFSRIMYLVA PSTVSSRSQP QPSIRLTSRI LKIAKSYNGQ DVREGLTGNL SATLEQLYAW
601: EKKLYKEVKD EEKLRVVYEE KCRTLKKLDS LGAESSKIDT TRAAIRKLLT KLDVCIRSVD SISSRIHKLR DEELQPQLTQ LIHGLIRMWR SMLKCHQKQF
701: QAIMESKVRS LRANTGLQRD SGLKAILDLE MELREWCISF NDWVNTQKSY VESLNGWLSR CLHYEPESTE DGIAPFSPSR VGAPQVFVIC KDWQEAMARI
801: SGENVSNAMQ GFASSLHELW ERQDEEQRQR VKAEYVSHDF EKRLNDLRME RARVRMRNDQ LQDGASEKSV VLSESGISAL DDLKVDLDSM RKKLEEERAR
901: HKETIKLVNN AASSSLQAGL VPIFEALGNF TSQVVKAHED VRFQQQQQPE SED
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9XI02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.