Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P08510_001 | Banana | nucleus | 52.61 | 55.5 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 38.42 | 46.21 |
| VIT_07s0031g02650.t01 | Wine grape | cytosol | 18.06 | 42.21 |
| VIT_18s0001g02480.t01 | Wine grape | nucleus | 36.24 | 38.33 |
| KRH64648 | Soybean | cytosol | 37.33 | 36.8 |
| PGSC0003DMT400045246 | Potato | mitochondrion | 11.64 | 36.78 |
| KRH53256 | Soybean | cytosol | 36.97 | 36.22 |
| CDY04672 | Canola | nucleus | 36.73 | 34.75 |
| Os01t0960200-00 | Rice | nucleus | 11.27 | 34.7 |
| CDY08177 | Canola | nucleus | 36.97 | 34.23 |
| Bra017947.1-P | Field mustard | nucleus | 37.33 | 33.59 |
| CDX88372 | Canola | nucleus | 33.45 | 33.41 |
| Bra015667.1-P | Field mustard | nucleus | 33.82 | 33.41 |
| CDY41788 | Canola | nucleus | 33.94 | 32.86 |
| Zm00001d011823_P002 | Maize | plastid | 34.91 | 32.07 |
| AT1G21740.1 | Thale cress | cytosol | 36.85 | 31.9 |
| AT1G77500.1 | Thale cress | nucleus | 33.94 | 31.85 |
| KXG34164 | Sorghum | plastid | 35.76 | 31.79 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 26.06 | 31.62 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 26.79 | 31.39 |
| GSMUA_Achr11P... | Banana | mitochondrion | 25.45 | 31.25 |
| HORVU3Hr1G110830.5 | Barley | cytosol, nucleus | 25.94 | 30.79 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 27.27 | 30.41 |
| Solyc06g060270.2.1 | Tomato | nucleus | 37.33 | 30.37 |
| TraesCS3D01G509700.1 | Wheat | plastid | 33.45 | 30.0 |
| TraesCS3B01G566500.1 | Wheat | plastid | 33.94 | 29.82 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 23.52 | 29.44 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 24.61 | 29.0 |
| CDX87516 | Canola | nucleus | 15.64 | 28.67 |
| CDY42454 | Canola | cytosol | 22.79 | 26.82 |
| Bra002985.1-P | Field mustard | nucleus | 23.15 | 26.38 |
| GSMUA_Achr8P34030_001 | Banana | cytosol | 19.03 | 26.34 |
| CDY18335 | Canola | cytosol | 22.55 | 26.31 |
| GSMUA_Achr1P07380_001 | Banana | cytosol, nucleus, peroxisome | 17.09 | 25.73 |
| AT5G54480.1 | Thale cress | nucleus | 21.82 | 25.0 |
| GSMUA_Achr2P22150_001 | Banana | cytosol | 17.7 | 24.75 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 17.09 | 23.78 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 17.94 | 23.68 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 17.45 | 23.15 |
| GSMUA_Achr11P... | Banana | cytosol | 18.06 | 22.37 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 15.88 | 21.76 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 16.85 | 21.52 |
| GSMUA_Achr1P26500_001 | Banana | cytosol | 13.7 | 21.44 |
| GSMUA_Achr3P00690_001 | Banana | nucleus | 12.48 | 20.32 |
| GSMUA_Achr11P... | Banana | cytosol | 16.12 | 20.15 |
| GSMUA_Achr3P24800_001 | Banana | nucleus | 14.42 | 19.73 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 14.3 | 19.19 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 16.12 | 19.0 |
| GSMUA_Achr11P... | Banana | nucleus | 16.36 | 18.67 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 14.91 | 18.41 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 15.76 | 17.66 |
| GSMUA_Achr1P17130_001 | Banana | nucleus | 12.73 | 17.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P19020_001 | EnsemblPlants:GSMUA_Achr3T19020_001 | EnsemblPlantsGene:GSMUA_Achr3G19020_001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil |
| PANTHER:PTHR21450 | PANTHER:PTHR21450:SF8 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI0002968643 |
| UniProt:M0SFW8 | MapMan:35.2 | : | : | : | : |
Description
DUF630/DUF632 domains containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G19020_001]
Coordinates
chr3:-:20412624..20418139
Molecular Weight (calculated)
91625.8 Da
IEP (calculated)
7.482
GRAVY (calculated)
-0.576
Length
825 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGSSKAEE SKLVALCRER TELIRAARDR RYALAAAHAA YFQALAAVGD AFHHFVHEEL APGSSVLVLP SSEGKRKART GRGSAITAAA ASSTSSSVTP
101: LSHSLSPEGS HLPLSSGSES EASPRGAGGG STSFADGKAS RVGSSGEGEI STSPHHRFSP TSPNSSFIRS PTAIPTMVSQ DPFASSWPNS AYDGYGYPFY
201: GVPIGSPPQE REDWAGPSAP AVAPGTPPQP PPNEASSWDF LDPFNYYEEF LPYYSGGKYG SRSSISSPDL SEVRKREGIP DLEEEADVEM TENNVVDDDL
301: RQKDSFSRSS NSGPSREIGG KHEKVGIELE EKERRSSSAG SKTISGGEDA GSNGKKKGVT FEDVSYVTEE SVRSSEKPLS AYSDDDQPLP VQGTRDVMEV
401: VQEIEEHFSS AAGCGEDISQ MLELGKLPYR SRKRDAIGKS TIRRKAGNAV ARNSTVARSG SLSSTLEKLY VWEKKLYREV KKRICVFIQL CQPAFTKINV
501: IIIRTAAHIH YRVQFKLDEE KLRVSYDKKH KWLKALDDRG AENSKIDLTW ASVRKLCTKI SIIIKSANAI SSRMHEIRDE ELQPLLIELI QGFIRMWKSL
601: LDCHQRQLRA VSNCKSHSLM MKTTSPRGPA AKATKKLELE LLNWCNCFDE WIRIQRAYVE VLNEWLMKWL PQEQEQTPDG LAPFSPTRLG APSAFIISND
701: WHHAIESISE EKVVDRMRAF VEIIHVIRKS QEEERRQRLE EQRLLQVYDR RLRSRQANQT NGHLEILQRL DEKRLTQKET LRRLQEAASS ILPSGLLPIV
801: QELETFTAEA LHVYSEIRTS NSGGA
101: LSHSLSPEGS HLPLSSGSES EASPRGAGGG STSFADGKAS RVGSSGEGEI STSPHHRFSP TSPNSSFIRS PTAIPTMVSQ DPFASSWPNS AYDGYGYPFY
201: GVPIGSPPQE REDWAGPSAP AVAPGTPPQP PPNEASSWDF LDPFNYYEEF LPYYSGGKYG SRSSISSPDL SEVRKREGIP DLEEEADVEM TENNVVDDDL
301: RQKDSFSRSS NSGPSREIGG KHEKVGIELE EKERRSSSAG SKTISGGEDA GSNGKKKGVT FEDVSYVTEE SVRSSEKPLS AYSDDDQPLP VQGTRDVMEV
401: VQEIEEHFSS AAGCGEDISQ MLELGKLPYR SRKRDAIGKS TIRRKAGNAV ARNSTVARSG SLSSTLEKLY VWEKKLYREV KKRICVFIQL CQPAFTKINV
501: IIIRTAAHIH YRVQFKLDEE KLRVSYDKKH KWLKALDDRG AENSKIDLTW ASVRKLCTKI SIIIKSANAI SSRMHEIRDE ELQPLLIELI QGFIRMWKSL
601: LDCHQRQLRA VSNCKSHSLM MKTTSPRGPA AKATKKLELE LLNWCNCFDE WIRIQRAYVE VLNEWLMKWL PQEQEQTPDG LAPFSPTRLG APSAFIISND
701: WHHAIESISE EKVVDRMRAF VEIIHVIRKS QEEERRQRLE EQRLLQVYDR RLRSRQANQT NGHLEILQRL DEKRLTQKET LRRLQEAASS ILPSGLLPIV
801: QELETFTAEA LHVYSEIRTS NSGGA
001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
Arabidopsis Description
DUF630 family protein, putative (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9CAQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.