Factsheet for GSMUA_Achr11P14380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P24800_001	Banana	nucleus	62.73	68.66
CDX87081	Canola	nucleus	48.33	59.74
VIT_04s0008g04200.t01	Wine grape	cytosol	57.88	54.03
KRH62002	Soybean	cytosol	56.67	53.51
KRH52653	Soybean	cytosol	56.67	52.6
GSMUA_Achr1P17130_001	Banana	nucleus	46.21	50.25
Solyc08g068100.2.1	Tomato	cytosol	54.55	49.66
Bra009853.1-P	Field mustard	nucleus	54.39	48.84
CDX80528	Canola	nucleus	53.79	48.43
CDX88193	Canola	nucleus	53.94	48.3
PGSC0003DMT400037619	Potato	plastid	46.97	47.99
Os05t0394200-01	Rice	nucleus	48.18	47.96
EES18173	Sorghum	nucleus	55.15	47.46
AT5G25590.1	Thale cress	nucleus	55.45	47.23
TraesCS1D01G246700.1	Wheat	nucleus	48.03	46.82
TraesCS1B01G258100.1	Wheat	nucleus	55.15	45.96
TraesCS1A01G247500.1	Wheat	nucleus	55.15	45.9
Zm00001d010488_P008	Maize	cytosol	49.55	41.55
GSMUA_Achr1P26500_001	Banana	cytosol	24.7	30.93
GSMUA_Achr3P00690_001	Banana	nucleus	21.97	28.6
GSMUA_Achr11P...	Banana	nucleus	27.12	24.76
GSMUA_Achr4P21640_001	Banana	nucleus	25.76	24.29
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	19.7	23.72
GSMUA_Achr8P10940_001	Banana	nucleus	26.06	23.37
GSMUA_Achr9P30410_001	Banana	cytosol	21.21	22.76
GSMUA_Achr5P00570_001	Banana	cytosol	23.03	22.75
GSMUA_Achr2P22150_001	Banana	cytosol	20.0	22.37
GSMUA_Achr6P32100_001	Banana	cytosol	20.3	22.26
GSMUA_Achr8P34030_001	Banana	cytosol	19.7	21.81
GSMUA_Achr7P16020_001	Banana	nucleus	19.24	20.32
GSMUA_Achr9P05210_001	Banana	nucleus	19.24	19.66
GSMUA_Achr11P...	Banana	cytosol	19.7	19.52
GSMUA_Achr11P...	Banana	mitochondrion	19.85	19.49
GSMUA_Achr7P04020_001	Banana	cytosol	20.61	19.43
GSMUA_Achr1P18120_001	Banana	cytosol	20.0	19.41
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	18.94	18.97
GSMUA_Achr3P14690_001	Banana	nucleus	19.55	18.32
GSMUA_Achr3P22040_001	Banana	cytosol	18.94	18.22
GSMUA_Achr9P08510_001	Banana	nucleus	20.76	17.52
GSMUA_Achr7P04930_001	Banana	nucleus	15.45	17.2
GSMUA_Achr3P00490_001	Banana	nucleus	16.06	17.04
GSMUA_Achr3P19020_001	Banana	cytosol	20.15	16.12

Protein Annotations

EnsemblPlants:GSMUA_Achr11P14380_001	EnsemblPlants:GSMUA_Achr11T14380_001	EnsemblPlantsGene:GSMUA_Achr11G14380_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF7	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002969BAD
UniProt:M0RS68	MapMan:35.1	:	:	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G14380_001]

Coordinates

chr11:-:15393304..15402026

Molecular Weight (calculated)

74205.8 Da

IEP (calculated)

7.662

GRAVY (calculated)

-0.749

Length

660 amino acids

Sequence
(BLAST)

001: MGCAQSRVDN EEAVTRCKER RQWMKAAVAE RNAFAAAHSA YAVALKNTGA ALSEFGQGEA HDPGPSSSTA TTAAAVPGPS GGFSPSPIQR SISMPDLPKN
101: SPSPSPSPAP PPPPPQSSPP PPPPPMPELK AMETWDYFFS SMDDNMQGPS LTPADEIRPA REDASEDRFK TSAPPPPTPL PPKVPRKPKQ GAHAHHQHAA
201: SAPALDAKRG KMVPVDRPSN NLLKVLTDLD DLFLKASEST HEVSKMLEAT RMHYHSNFAD SRGHIDHSAR VMRVITWNRS FKGMADADGG KDDFDNDEWE
301: THATVLDKIL AWEKKLYDEV KAGELMKIEY QRKVALLNRQ KKRGVSSEAL ERTKAAVSHL HTRYIVDMQS MDSTVSEIER LRDKQLYPKL VELVEGMAQM
401: WYAMYMHHQA QLKIVEGLKS LDVTNSPRET SEHHHKHTFQ LLEIAKEWHT QFNKLVSHQK DYVESLNSWL KLTLIPIESS LKEKVSSPQR PAHAPIQSLL
501: HAWHEYLGKL PDELAKSAIL SFSAVINTIV TLQQEERKQK EKCEEAHKEY SKKNRAFDDW FQKYSQRRMG SSVGEPDGGE GSNQKDPVEE RRFMVESLKS
601: KFDEEVEAHR RLCKQVREKS LSSLKTHLPE LFRAMSDFAN ACSKMYASLK MITEQDPPTN

Best Arabidopsis Sequence Match ( AT5G25590.1 )
(BLAST)

001: MGCAQSRVDN EEAVARCKER RNVIKEAVSA SKAFAAGHFA YAIALKNTGA ALSDYGHGES DQKALDDVLL DQQHYEKQSR NNVDPASPQP PPPPPIENLP
101: PPPPPLPKFS PSPIKRAISL PSMAVRGRKV QTLDGMAIEE EEEDEEEEEE VKGSGRDTAQ EEEEPRTPEN VGKSNGRKRL EKTTPEIVSA SPANSMAWDY
201: FFMVENMPGP NLDDREVRNG YENQSSHFQF NEEDDEEEEE EERSGIYRKK SGSGKVVEEM EPKTPEKVEE EEEEDEEEDE EEEEEEEEEV VVEVKKKKKG
301: KAKIEHSSTA PPEFRRAVAK TSAAASSSVN LMKILDEIDD RFLKASECAQ EVSKMLEATR LHYHSNFADN RGYVDHSARV MRVITWNKSL RGISNGEGGK
401: DDQESDEHET HATVLDKLLA WEKKLYDEVK QGELMKIEYQ KKVSLLNRHK KRGASAETVE KTKAAVSHLH TRYIVDMQSM DSTVSEVNRL RDDQLYPRLV
501: ALVEGMAKMW TNMCIHHDTQ LGIVGELKAL EISTSLKETT KQHHHQTRQF CTVLEEWHVQ FDTLVTHQKQ YINSLNNWLK LNLIPIESSL KEKVSSPPRP
601: QRPPIQALLH SWHDRLEKLP DEVAKSAISS FAAVIKTILL HQEEEMKLKE KCEETRREFI RKKQGFEDWY QKHLQKRGPT EEAEGGDDAT TSSRDHVTER
701: RIAVETLKKR LEEEEEAHQR HCVQVREKSL NSLKIRLPEI FRALSDYAHA CADSYEKLRI ISQSQKSNGG ATESS

Arabidopsis Description

DNA ligase (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q8RWW9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.