Factsheet for GSMUA_Achr8P10940_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	79.89	81.33
GSMUA_Achr4P21640_001	Banana	nucleus	64.13	67.43
Os10t0562700-01	Rice	nucleus	64.95	62.32
TraesCS1B01G231600.1	Wheat	nucleus	63.86	61.12
Zm00001d029946_P003	Maize	nucleus	64.54	60.98
TraesCS1D01G219800.1	Wheat	nucleus	63.72	60.83
TraesCS1A01G218200.1	Wheat	nucleus	63.32	60.6
EER94480	Sorghum	nucleus	64.13	60.13
Zm00001d000039_P001	Maize	nucleus	63.72	60.05
CDX83412	Canola	nucleus	51.22	56.02
KRH01066	Soybean	nucleus	54.21	54.73
AT1G02110.1	Thale cress	nucleus	51.36	53.77
CDY41178	Canola	nucleus	52.58	53.68
CDX71821	Canola	nucleus	51.77	53.66
Bra007523.1-P	Field mustard	nucleus	52.58	53.53
CDX95620	Canola	nucleus	50.54	53.53
CDY42691	Canola	nucleus	52.04	52.97
CDY56992	Canola	nucleus	52.04	52.68
KRH40173	Soybean	nucleus	54.35	52.08
Bra014497.1-P	Field mustard	nucleus	52.31	50.52
Bra000365.1-P	Field mustard	nucleus	54.08	49.63
VIT_15s0021g01550.t01	Wine grape	nucleus	56.79	49.47
AT3G60320.1	Thale cress	nucleus	53.4	49.37
KRH66512	Soybean	nucleus	52.04	47.93
PGSC0003DMT400066867	Potato	nucleus	54.89	47.42
Solyc01g090270.2.1	Tomato	nucleus	54.21	45.55
GSMUA_Achr1P26500_001	Banana	cytosol	28.12	39.28
GSMUA_Achr3P00690_001	Banana	nucleus	25.27	36.69
GSMUA_Achr9P30410_001	Banana	cytosol	26.36	31.54
GSMUA_Achr5P00570_001	Banana	cytosol	26.63	29.34
GSMUA_Achr11P...	Banana	cytosol	23.37	26.06
GSMUA_Achr3P24800_001	Banana	nucleus	20.38	24.88
GSMUA_Achr1P07380_001	Banana	cytosol, nucleus, peroxisome	17.8	23.91
GSMUA_Achr1P17130_001	Banana	nucleus	19.02	23.06
GSMUA_Achr8P34030_001	Banana	cytosol	18.34	22.65
GSMUA_Achr2P22150_001	Banana	cytosol	17.53	21.86
GSMUA_Achr3P22040_001	Banana	cytosol	19.84	21.28
GSMUA_Achr7P16020_001	Banana	nucleus	17.53	20.64
GSMUA_Achr6P32100_001	Banana	cytosol	16.71	20.43
GSMUA_Achr3P14690_001	Banana	nucleus	19.43	20.31
GSMUA_Achr1P18120_001	Banana	cytosol	18.75	20.29
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	17.8	19.88
GSMUA_Achr11P...	Banana	mitochondrion	17.93	19.64
GSMUA_Achr7P04020_001	Banana	cytosol	18.48	19.43
GSMUA_Achr3P00490_001	Banana	nucleus	16.3	19.29
GSMUA_Achr7P04930_001	Banana	nucleus	15.35	19.06
GSMUA_Achr9P05210_001	Banana	nucleus	16.71	19.04
GSMUA_Achr11P...	Banana	cytosol	16.85	18.62
GSMUA_Achr9P08510_001	Banana	nucleus	18.07	17.01
GSMUA_Achr3P19020_001	Banana	cytosol	17.66	15.76

Protein Annotations

EnsemblPlants:GSMUA_Achr8P10940_001	EnsemblPlants:GSMUA_Achr8T10940_001	EnsemblPlantsGene:GSMUA_Achr8G10940_001	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF9	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI000296E6E8
UniProt:M0TPE7	MapMan:35.1	:	:	:	:

Description

Putative uncharacterized protein Sb01g028920 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10940_001]

Coordinates

chr8:-:7843699..7848274

Molecular Weight (calculated)

82167.5 Da

IEP (calculated)

7.785

GRAVY (calculated)

-0.626

Length

736 amino acids

Sequence
(BLAST)

001: MGCTASRLEN EDCVRRCKER RRLMKEAVHS RHHLASAHSD YLCSLRLTGS ALTRFALGEP LAVSEQTPPI LLRSSFSASA ASSFPPSKPQ PPPAPSPPAP
101: RPRRRPRRHH DFSPSPSPSV VSSSTSFRKP STSAASDAGH PGFPPRNSTY ATTPSQSSSA WDWTKCCPPS PPNSEFFERR KTELEEKNRL RHHLPPEEEV
201: DESEEEHVAP AEEGRGGREE VYCREWGEHC TSPTSSSTRS DGEPQREEGR EDERDTVSTS ESTATRSEYA PTGVQETTSS FAAAAELPMV VRHHNLAEIA
301: AAIEEYFIKA ADAGSAVSDL LEIGRAQFDG SFRQLKKTVY HSNSVLSALS SSWTSKPPLA IRYRLDTAAL EESGGGKSHL STLERLLAWE KKLYEEVKAR
401: EGVKIEHEKK LSTLQSQEYS GKEDAKLDKT KASIKKLQSL IIVTSQAVTT TSSAITKVRD DELAPQLVQI CYALLNMWSQ MNWFHDVQNH VVQQVRGLVN
501: RASSGESTSD LHRLATRDLE AAVSAWHSSF NRLIKYYRDY VRSLYGWLNL TLLQISSDAP QKDHSSHIVI ELTAFCDEWK QALDRLPNTV ASEAVKSFMN
601: VIHVIYTKQA EELKIKKRAE DYSKELEKKS RALRRIEKRY YQSSMVGMVL PGGGRDNDGQ VFDTRDPLAE KKSEITACRI KVEDEMMRHA KAVEVTRSMT
701: LNNIQTGLPG VFQALTGFSA MFVEAMEGVC RRGVSV

Best Arabidopsis Sequence Match ( AT1G02110.1 )
(BLAST)

001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN

Arabidopsis Description

BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.