Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42691 | Canola | nucleus | 78.14 | 86.03 |
| CDY56992 | Canola | nucleus | 78.14 | 85.56 |
| Bra014497.1-P | Field mustard | nucleus | 80.15 | 83.73 |
| CDY41178 | Canola | nucleus | 73.74 | 81.41 |
| Bra007523.1-P | Field mustard | nucleus | 73.74 | 81.19 |
| CDX71821 | Canola | nucleus | 71.11 | 79.72 |
| AT1G02110.1 | Thale cress | nucleus | 60.43 | 68.42 |
| KRH01066 | Soybean | nucleus | 62.19 | 67.9 |
| KRH40173 | Soybean | nucleus | 63.44 | 65.76 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 65.95 | 62.13 |
| PGSC0003DMT400066867 | Potato | nucleus | 63.44 | 59.27 |
| KRH66512 | Soybean | nucleus | 59.42 | 59.2 |
| Solyc01g090270.2.1 | Tomato | nucleus | 62.19 | 56.51 |
| GSMUA_Achr11P... | Banana | nucleus | 50.63 | 55.74 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 49.37 | 53.4 |
| Os10t0562700-01 | Rice | nucleus | 51.38 | 53.32 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 46.48 | 52.86 |
| Zm00001d029946_P003 | Maize | nucleus | 51.13 | 52.25 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 50.38 | 52.15 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 50.25 | 52.02 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 50.38 | 52.01 |
| EER94480 | Sorghum | nucleus | 51.01 | 51.72 |
| Zm00001d000039_P001 | Maize | nucleus | 50.38 | 51.34 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 26.63 | 38.62 |
| Zm00001d051338_P002 | Maize | nucleus | 25.75 | 37.41 |
| KXG31098 | Sorghum | cytosol, plastid | 26.76 | 36.79 |
| Os02t0654600-00 | Rice | nucleus | 27.51 | 36.68 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 25.88 | 36.65 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 25.88 | 36.4 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 26.0 | 36.32 |
| HORVU6Hr1G062350.2 | Barley | plastid | 26.0 | 36.25 |
| AT3G51290.2 | Thale cress | cytosol | 29.9 | 29.82 |
| AT2G34670.2 | Thale cress | nucleus | 23.62 | 27.09 |
| AT5G25590.1 | Thale cress | nucleus | 22.24 | 22.84 |
| AT1G52320.5 | Thale cress | nucleus | 22.36 | 22.31 |
| AT1G20530.1 | Thale cress | cytosol | 16.21 | 21.01 |
| AT4G39790.1 | Thale cress | plastid | 16.46 | 19.94 |
| AT4G30130.3 | Thale cress | nucleus | 18.09 | 19.86 |
| AT2G17110.1 | Thale cress | nucleus | 18.22 | 19.78 |
| AT2G27090.2 | Thale cress | nucleus | 18.22 | 19.52 |
| AT5G54480.1 | Thale cress | nucleus | 16.58 | 18.33 |
| AT2G19090.1 | Thale cress | nucleus | 18.47 | 18.06 |
| AT4G35240.1 | Thale cress | nucleus | 19.35 | 17.8 |
| AT1G77500.1 | Thale cress | nucleus | 18.47 | 16.72 |
| AT1G21740.1 | Thale cress | cytosol | 18.72 | 15.63 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825203 | ProteinID:AEE80044.1 | EMBL:AK221747 | ArrayExpress:AT3G60320 | EnsemblPlantsGene:AT3G60320 |
| RefSeq:AT3G60320 | TAIR:AT3G60320 | RefSeq:AT3G60320-TAIR-G | EnsemblPlants:AT3G60320.1 | TAIR:AT3G60320.1 | EMBL:AY059759 |
| Unigene:At.22086 | ProteinID:CAB87869.1 | ncoils:Coil | InterPro:DUF630 | InterPro:DUF632 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010167 | GO:GO:0015706 | GO:GO:0071249 | GO:GO:0071705 |
| GO:GO:1901698 | RefSeq:NP_191591.2 | PFAM:PF04782 | PFAM:PF04783 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF9 |
| UniProt:Q93YU8 | UniParc:UPI00000A6369 | SEG:seg | : | : | : |
Description
NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
Coordinates
chr3:-:22291886..22295529
Molecular Weight (calculated)
89983.9 Da
IEP (calculated)
6.921
GRAVY (calculated)
-0.774
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.