Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04477 | Canola | nucleus | 81.83 | 84.56 |
| Bra012035.1-P | Field mustard | nucleus | 81.7 | 84.19 |
| CDX71474 | Canola | nucleus | 80.75 | 83.45 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 36.34 | 57.32 |
| KRG89850 | Soybean | nucleus | 58.41 | 55.36 |
| KRH18693 | Soybean | nucleus | 59.62 | 55.03 |
| KRH14687 | Soybean | nucleus | 57.34 | 54.41 |
| KRH73448 | Soybean | nucleus | 57.2 | 54.28 |
| Solyc09g007100.2.1 | Tomato | nucleus | 54.91 | 53.4 |
| PGSC0003DMT400005111 | Potato | nucleus | 54.37 | 52.54 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 25.71 | 50.13 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 41.18 | 47.37 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 37.95 | 46.84 |
| KXG39486 | Sorghum | nucleus | 45.63 | 40.84 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 43.61 | 39.75 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 43.2 | 39.48 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 43.07 | 39.36 |
| Os03t0321500-01 | Rice | plasma membrane | 44.28 | 39.03 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 43.47 | 38.87 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 27.32 | 37.38 |
| Zm00001d028960_P001 | Maize | nucleus | 44.41 | 37.37 |
| AT4G39790.1 | Thale cress | plastid | 31.76 | 35.92 |
| Os07t0686500-01 | Rice | endoplasmic reticulum | 34.19 | 35.57 |
| AT4G30130.3 | Thale cress | nucleus | 24.5 | 25.1 |
| AT2G17110.1 | Thale cress | nucleus | 23.69 | 24.01 |
| AT2G19090.1 | Thale cress | nucleus | 24.36 | 22.24 |
| AT1G20530.1 | Thale cress | cytosol | 18.17 | 21.99 |
| AT1G77500.1 | Thale cress | nucleus | 24.09 | 20.36 |
| AT4G35240.1 | Thale cress | nucleus | 23.55 | 20.23 |
| AT1G02110.1 | Thale cress | nucleus | 18.71 | 19.77 |
| AT1G21740.1 | Thale cress | cytosol | 24.5 | 19.1 |
| AT1G52320.5 | Thale cress | nucleus | 20.05 | 18.67 |
| AT5G25590.1 | Thale cress | nucleus | 19.25 | 18.45 |
| AT3G60320.1 | Thale cress | nucleus | 19.52 | 18.22 |
| AT2G34670.2 | Thale cress | nucleus | 16.42 | 17.58 |
| AT3G51290.2 | Thale cress | cytosol | 18.44 | 17.17 |
| AT5G54480.1 | Thale cress | nucleus | 15.88 | 16.39 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817251 | ProteinID:AAC77867.1 | ProteinID:AEC07935.1 | EMBL:AK226666 | ProteinID:ANM62682.1 |
| ArrayExpress:AT2G27090 | EnsemblPlantsGene:AT2G27090 | RefSeq:AT2G27090 | TAIR:AT2G27090 | RefSeq:AT2G27090-TAIR-G | EnsemblPlants:AT2G27090.2 |
| Unigene:At.38811 | EMBL:BT012583 | ncoils:Coil | InterPro:DUF630 | InterPro:DUF632 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0009506 | GO:GO:0016020 | RefSeq:NP_001324823.1 | RefSeq:NP_180277.1 |
| PFAM:PF04782 | PFAM:PF04783 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 | UniProt:Q9ZVD1 | UniParc:UPI00000A1AEE |
| SEG:seg | : | : | : | : | : |
Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
Coordinates
chr2:-:11567436..11571506
Molecular Weight (calculated)
83741.1 Da
IEP (calculated)
6.375
GRAVY (calculated)
-0.783
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.