Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52975 | Canola | nucleus | 77.44 | 82.73 |
| Bra018963.1-P | Field mustard | nucleus | 76.94 | 81.87 |
| CDY61085 | Canola | nucleus | 76.07 | 81.37 |
| VIT_09s0002g04590.t01 | Wine grape | nucleus | 47.62 | 62.09 |
| Solyc03g120140.2.1 | Tomato | cytosol | 20.18 | 56.1 |
| KRH09858 | Soybean | nucleus | 50.75 | 54.44 |
| KRH23466 | Soybean | nucleus | 50.38 | 53.67 |
| OQU88702 | Sorghum | cytosol | 27.19 | 49.21 |
| AT5G25590.1 | Thale cress | nucleus | 47.12 | 48.52 |
| TraesCS2B01G181100.1 | Wheat | nucleus | 38.35 | 42.32 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 38.35 | 42.09 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 38.1 | 41.7 |
| Os07t0211900-01 | Rice | plasma membrane | 38.35 | 41.52 |
| Zm00001d019173_P001 | Maize | nucleus | 35.84 | 38.54 |
| AT1G02110.1 | Thale cress | nucleus | 21.93 | 24.89 |
| AT2G34670.2 | Thale cress | nucleus | 19.55 | 22.48 |
| AT1G20530.1 | Thale cress | cytosol | 17.29 | 22.48 |
| AT3G60320.1 | Thale cress | nucleus | 22.31 | 22.36 |
| AT3G51290.2 | Thale cress | cytosol | 21.43 | 21.43 |
| AT4G39790.1 | Thale cress | plastid | 17.54 | 21.31 |
| AT2G27090.2 | Thale cress | nucleus | 18.67 | 20.05 |
| AT2G17110.1 | Thale cress | nucleus | 17.79 | 19.37 |
| AT4G30130.3 | Thale cress | nucleus | 17.04 | 18.76 |
| AT1G77500.1 | Thale cress | nucleus | 18.67 | 16.95 |
| AT4G35240.1 | Thale cress | nucleus | 18.3 | 16.88 |
| AT2G19090.1 | Thale cress | nucleus | 17.17 | 16.83 |
| AT1G21740.1 | Thale cress | cytosol | 19.42 | 16.26 |
| AT5G54480.1 | Thale cress | nucleus | 13.78 | 15.28 |
Protein Annotations
| MapMan:35.1 | EntrezGene:841662 | ProteinID:AAG51544.1 | ProteinID:AEE32783.1 | ProteinID:ANM60331.1 | ArrayExpress:AT1G52320 |
| EnsemblPlantsGene:AT1G52320 | RefSeq:AT1G52320 | TAIR:AT1G52320 | RefSeq:AT1G52320-TAIR-G | EnsemblPlants:AT1G52320.5 | Unigene:At.20580 |
| ncoils:Coil | InterPro:DUF630 | InterPro:DUF632 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | RefSeq:NP_001322627.1 | RefSeq:NP_849796.2 | PFAM:PF04782 | PFAM:PF04783 | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF22 | UniProt:Q9C824 | SUPFAM:SSF81995 | UniParc:UPI00000A2A93 | SEG:seg | : |
Description
BZIP protein, putative; 48652-45869 [Source:UniProtKB/TrEMBL;Acc:Q9C824]
Coordinates
chr1:+:19484221..19487546
Molecular Weight (calculated)
90460.0 Da
IEP (calculated)
5.942
GRAVY (calculated)
-0.886
Length
798 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAQSKIEN EEAVTRCKER KQLMKDAVTA RNAFAAAHSA YAMALKNTGA ALSDYSHGEF LVSNHSSSSA AAAIASTSSL PTAISPPLPS STAPVSNSTA
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.