Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009665.1-P | Field mustard | cytosol | 70.26 | 72.84 |
| CDX88008 | Canola | nucleus | 70.94 | 72.73 |
| CDY07877 | Canola | cytosol | 70.94 | 72.73 |
| AT4G35240.1 | Thale cress | nucleus | 71.62 | 60.69 |
| KRH14028 | Soybean | cytosol | 52.8 | 52.8 |
| KRH74089 | Soybean | cytosol | 54.71 | 51.21 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 52.66 | 47.54 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 52.11 | 47.34 |
| Solyc10g074470.1.1 | Tomato | cytosol | 51.84 | 47.32 |
| Solyc01g112050.2.1 | Tomato | nucleus | 54.3 | 44.72 |
| Os02t0669900-01 | Rice | cytosol | 25.65 | 44.03 |
| PGSC0003DMT400048013 | Potato | nucleus | 54.16 | 43.48 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 21.28 | 41.71 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 37.24 | 38.78 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.06 | 38.24 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 35.06 | 37.79 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 28.1 | 37.59 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 34.92 | 36.57 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 32.33 | 35.96 |
| Zm00001d017553_P001 | Maize | cytosol | 36.43 | 35.46 |
| OQU85656 | Sorghum | cytosol | 36.7 | 35.12 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 36.02 | 34.74 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 36.02 | 34.6 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 35.88 | 34.47 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 35.74 | 34.38 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 28.51 | 34.15 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 30.42 | 34.05 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 34.65 | 33.38 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 34.52 | 33.33 |
| KXG26898 | Sorghum | cytosol | 35.74 | 33.04 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 34.38 | 32.9 |
| Os08t0551200-00 | Rice | cytosol | 36.02 | 32.59 |
| Zm00001d002669_P002 | Maize | cytosol | 34.92 | 32.45 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 35.61 | 32.22 |
| AT1G20530.1 | Thale cress | cytosol | 26.88 | 32.08 |
| Zm00001d026130_P001 | Maize | nucleus | 34.24 | 31.81 |
| Os09t0547300-01 | Rice | nucleus | 39.56 | 31.56 |
| EER97130 | Sorghum | nucleus | 39.29 | 31.54 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 34.24 | 31.45 |
| Zm00001d006286_P001 | Maize | nucleus | 39.15 | 31.4 |
| Zm00001d021452_P001 | Maize | nucleus | 39.43 | 30.71 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 39.15 | 29.9 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 39.15 | 29.77 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 39.29 | 29.75 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 38.88 | 29.72 |
| AT1G77500.1 | Thale cress | nucleus | 33.97 | 28.33 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 35.47 | 27.72 |
| AT1G21740.1 | Thale cress | cytosol | 35.88 | 27.6 |
| AT4G30130.3 | Thale cress | nucleus | 24.01 | 24.28 |
| AT4G39790.1 | Thale cress | plastid | 21.69 | 24.2 |
| AT2G27090.2 | Thale cress | nucleus | 24.01 | 23.69 |
| AT2G19090.1 | Thale cress | nucleus | 24.97 | 22.48 |
| AT5G54480.1 | Thale cress | nucleus | 21.15 | 21.53 |
| AT1G02110.1 | Thale cress | nucleus | 18.96 | 19.77 |
| AT3G60320.1 | Thale cress | nucleus | 19.78 | 18.22 |
| AT3G51290.2 | Thale cress | cytosol | 19.65 | 18.05 |
| AT1G52320.5 | Thale cress | nucleus | 19.37 | 17.79 |
| AT5G25590.1 | Thale cress | nucleus | 18.55 | 17.55 |
| AT2G34670.2 | Thale cress | nucleus | 16.37 | 17.29 |
Protein Annotations
| MapMan:35.1 | EntrezGene:816215 | UniProt:A0A178VUM9 | ProteinID:AEC06586.1 | ArrayExpress:AT2G17110 | EnsemblPlantsGene:AT2G17110 |
| RefSeq:AT2G17110 | TAIR:AT2G17110 | RefSeq:AT2G17110-TAIR-G | EnsemblPlants:AT2G17110.1 | TAIR:AT2G17110.1 | ncoils:Coil |
| InterPro:DUF630 | InterPro:DUF632 | UniProt:F4IMF6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003899 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0032774 | RefSeq:NP_565405.2 | ProteinID:OAP10107.1 | PFAM:PF04782 | PFAM:PF04783 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | UniParc:UPI000034ED2B | SEG:seg | : | : | : |
Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
Coordinates
chr2:-:7442707..7446099
Molecular Weight (calculated)
82638.9 Da
IEP (calculated)
5.701
GRAVY (calculated)
-0.714
Length
733 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.