CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017553_P001	Maize	cytosol	89.43	90.97
Os02t0669900-01	Rice	cytosol	43.99	78.92
TraesCS6B01G271800.1	Wheat	nucleus	70.1	70.47
TraesCS6D01G235200.1	Wheat	nucleus	69.71	69.99
TraesCS6A01G253600.1	Wheat	nucleus	69.45	69.72
HORVU6Hr1G064670.13	Barley	nucleus	68.41	68.95
KXG26898	Sorghum	cytosol	59.66	57.63
GSMUA_Achr11P...	Banana	mitochondrion	39.3	44.79
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	35.25	40.97
Bra009665.1-P	Field mustard	cytosol	36.03	39.04
CDX88008	Canola	nucleus	36.29	38.88
CDX76322	Canola	cytosol	35.64	38.61
CDY17530	Canola	cytosol	35.64	38.45
CDY07877	Canola	cytosol	35.38	37.9
Bra020807.1-P	Field mustard	nucleus	36.68	36.83
AT2G17110.1	Thale cress	nucleus	35.12	36.7
Solyc10g074470.1.1	Tomato	cytosol	37.73	35.99
PGSC0003DMT400043330	Potato	mitochondrion	37.86	35.94
CDX75484	Canola	cytosol, plastid	32.51	35.72
KRH14028	Soybean	cytosol	34.07	35.61
CDX69122	Canola	nucleus	34.73	35.42
KRH74089	Soybean	cytosol	36.16	35.38
EER97130	Sorghum	nucleus	41.38	34.72
Bra011597.1-P	Field mustard	nucleus	37.73	34.57
AT4G35240.1	Thale cress	nucleus	39.03	34.57
VIT_03s0038g03260.t01	Wine grape	cytosol	35.77	33.74
VIT_18s0001g00170.t01	Wine grape	cytosol	32.51	33.56
PGSC0003DMT400048013	Potato	nucleus	38.77	32.53
KRH60958	Soybean	cytosol	28.07	32.48
Solyc01g112050.2.1	Tomato	nucleus	37.73	32.47
KRH51633	Soybean	cytosol	27.55	31.78
CDY31475	Canola	nucleus	23.37	29.73
AT1G20530.1	Thale cress	cytosol	23.24	28.99
EES19545	Sorghum	nucleus	28.98	24.61
EER97113	Sorghum	cytosol	23.24	24.59
KXG36086	Sorghum	nucleus	18.8	21.95
EES06355	Sorghum	cytosol	16.84	21.04
KXG34164	Sorghum	plastid	25.33	20.91
EES08807	Sorghum	nucleus	19.06	20.31
OQU80872	Sorghum	nucleus	20.63	19.85
KXG31098	Sorghum	cytosol, plastid	14.1	18.65
EER94480	Sorghum	nucleus	18.93	18.47
EES00973	Sorghum	nucleus	16.58	18.09
OQU88702	Sorghum	cytosol	9.92	17.23
EES18173	Sorghum	nucleus	16.97	16.95
Bra025823.1-P	Field mustard	peroxisome	23.89	15.94
KXG39486	Sorghum	nucleus	17.23	15.9
CDY29526	Canola	peroxisome	23.76	15.84
KXG32552	Sorghum	nucleus	15.8	15.36

Protein Annotations

EnsemblPlants:OQU85656	EnsemblPlantsGene:SORBI_3004G286200	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF16	PFAM:PF04782	PFAM:PF04783	ProteinID:OQU85656	ProteinID:OQU85656.1	SEG:seg
UniParc:UPI000B42587D	UniProt:A0A1Z5RQI4	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:62854641..62859131

Molecular Weight (calculated)

83941.2 Da

IEP (calculated)

7.421

GRAVY (calculated)

-0.431

Length

766 amino acids

Sequence
(BLAST)

001: MGCKGSKLDE QEAVALCRGR ADLLAAAVRH RYALADAHDA LADSLASVAA ALHLLMTAPG QQRLALPAAR KDVDAPPAPA PAAAAAASSP PHSSSHINFA
101: PSSDSESGSV TSSPPHRRRL AAGYDQLPQH HPLSLPLPYP HYGYGYAPEP FPYGGGYPQP PGSLRLYYAR SRPPPASVAV VEQRTAASER VYYGSVEPTA
201: GGDTRYYSYG GGEPAGRATA PTPPPPSPPR TTSWDFFNVF GDYDVYDNYC YDAGGGAGGA TSAAYTPSRS SREVREEEGI PDLEDDDAVV KQVAGEFSAP
301: GSGARSRRSS LGGVSSSIAE VDEEENSVVD KEVIGAPAPR NTAASAPTPR GPVDTTDVAG EIKAQFIRAA DAVRALSPLL EVGRRRYHHR SSVYHVSSSM
401: VSAIALPHSD LGGIELLDCG SEKVLGGRSL SLTLEKLFMW EKKLYDEVKA EEKMRLLLAK NAKRLKYLDL KGAEAQKIDT TRNMVRKLSA KLRISVRVIT
501: KVSKRINRVR DEELWPQINA LIQGFVRMWR DKLDCYQIQC QVISEAKNLD SIVPDGRSRE LALELELEMM KWIVNFSSWV NEQRSFVKAL NGWLSLCLDY
601: KTEETVDGVP PYSPGRVGAP LVFVICNSWS QAMDRFSEKE VVTSMQALVS SVRKLLEKQN VEQMEQMIVT RERERWNKIL EKKTVEINKE ADVLNRKLAL
701: VPGRHSRLPS AQTYQEHLLD ASSLQSSLQR VVQALESFTS NSLQALEQTL RHAEEERSSR ESAKVS

Best Arabidopsis Sequence Match ( AT4G35240.3 )
(BLAST)

001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.