CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053766_P001	Maize	cytosol	87.11	85.44
Os02t0175200-00	Rice	cytosol, mitochondrion	36.38	70.79
TraesCS6B01G182400.1	Wheat	cytosol	69.0	67.57
TraesCS6A01G154500.2	Wheat	cytosol	69.33	67.35
TraesCS6D01G144300.1	Wheat	cytosol	69.0	66.82
HORVU0Hr1G015650.2	Barley	cytosol, nucleus	43.07	59.73
Os02t0175301-00	Rice	nucleus	35.4	57.87
CDY28161	Canola	nucleus	11.42	34.15
KRH02818	Soybean	nucleus	37.19	30.6
CDY66508	Canola	cytosol, nucleus	20.88	30.26
KRH19063	Soybean	nucleus	36.7	30.04
Bra011166.1-P	Field mustard	nucleus	31.97	29.56
CDY28162	Canola	cytosol	19.09	28.96
PGSC0003DMT400015690	Potato	nucleus	35.24	28.27
CDX68628	Canola	nucleus	31.16	28.25
VIT_11s0103g00310.t01	Wine grape	nucleus	35.24	28.16
KRH12287	Soybean	nucleus	35.24	27.94
Solyc07g047830.2.1	Tomato	nucleus	34.75	27.92
OQU80872	Sorghum	nucleus	36.22	27.89
KRH37304	Soybean	nucleus	34.75	27.84
AT4G30130.3	Thale cress	nucleus	32.63	27.59
CDY39136	Canola	nucleus	33.12	26.96
CDX82615	Canola	nucleus	33.12	26.92
Bra038839.1-P	Field mustard	nucleus	34.09	26.59
AT2G19090.1	Thale cress	nucleus	33.93	25.55
Bra038563.1-P	Field mustard	nucleus	33.77	25.52
EER97113	Sorghum	cytosol	22.35	18.92
KXG31098	Sorghum	cytosol, plastid	17.13	18.13
EES08807	Sorghum	nucleus	21.21	18.08
KXG36086	Sorghum	nucleus	18.92	17.68
OQU88702	Sorghum	cytosol	12.4	17.23
KXG39486	Sorghum	nucleus	23.0	16.99
OQU85656	Sorghum	cytosol	21.04	16.84
EER97130	Sorghum	nucleus	22.84	15.33
EES19545	Sorghum	nucleus	22.35	15.19
EES00973	Sorghum	nucleus	17.29	15.1
KXG32552	Sorghum	nucleus	18.76	14.59
EES18173	Sorghum	nucleus	17.94	14.34
KXG26898	Sorghum	cytosol	18.43	14.25
EER94480	Sorghum	nucleus	17.94	14.01
KXG34164	Sorghum	plastid	20.72	13.69

Protein Annotations

EnsemblPlants:EES06355	EnsemblPlantsGene:SORBI_3004G060000	EntrezGene:8077197	InterPro:DUF630	InterPro:DUF632	PANTHER:PTHR21450
PANTHER:PTHR21450:SF3	PFAM:PF04782	PFAM:PF04783	ProteinID:EES06355	ProteinID:EES06355.1	RefSeq:XP_002453379.1
SEG:seg	UniParc:UPI0001A85ADA	UniProt:C5XW72	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr4:-:4807062..4809539

Molecular Weight (calculated)

66981.7 Da

IEP (calculated)

4.600

GRAVY (calculated)

-0.438

Length

613 amino acids

Sequence
(BLAST)

001: MGCSSSKLDE EAAVKTCHDR KSFVKKAIAQ RDLLASSHVA YVQSLRRVSM ALVYYFAEDE HLYRLQEASY VHYPGSPEKV LVVNCLRPAG APVHPVVEQW
101: EPPEAIEAAT IDRFFGTDMN STPVSPQPPR WDLFWDPFSS LADHPNYGVE EVKGDQEDEQ IPELEEESDD DDGGGGGEGE AEEVEEKGEP AAVAAPVVPP
201: PPAREKVGRK VDHVKNELRV LATAEVEQHN GAPGFTVYVD RPPTSMGEAM DDIQGHFRKI LDTAKEVSVL LEVVPYQRRV QPPVPRDDGE EQGAPEVPPE
301: PFELFQSHKE SLDRLYEWEK RLYEEVRAGE KVRLAYEKKC ALLRSQDANG AEPIAIEKTR VVVRDLRTKL DISLTSVDAV SRRIAAVRDD ELLPQLMQLV
401: RGLARMWRVI ADAHRVMKRT ADDSIALLTS SAAAAEAARP VPTGEGGTRG PPPPPGAARA AAGAGALGSE LRGWRAALEA WAESQRAYAA ALWGWARSCV
501: KDGEDMPRLI VGWARAVDSV DVEPATRAVD AVAAEAAAVA SAAKRQRGGG EEWFNEEEGK KKVCVALAAA LGAIAEAGGL AVFGYDELLL EMEMGARERE
601: REIAGRDEES IQN

Best Arabidopsis Sequence Match ( AT2G19090.1 )
(BLAST)

001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.