CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19063	Soybean	nucleus	92.75	92.26
KRH12287	Soybean	nucleus	74.36	71.67
KRH37304	Soybean	nucleus	72.75	70.85
VIT_11s0103g00310.t01	Wine grape	nucleus	65.37	63.49
PGSC0003DMT400015690	Potato	nucleus	62.55	60.99
Solyc07g047830.2.1	Tomato	nucleus	62.42	60.94
CDY28162	Canola	cytosol	32.35	59.65
CDY66508	Canola	cytosol, nucleus	32.35	56.97
Bra011166.1-P	Field mustard	nucleus	48.99	55.05
AT4G30130.3	Thale cress	nucleus	52.89	54.34
CDX68628	Canola	nucleus	49.13	54.14
CDY28161	Canola	nucleus	14.77	53.66
GSMUA_Achr7P16020_001	Banana	nucleus	43.22	51.52
CDY39136	Canola	nucleus	51.28	50.73
CDX82615	Canola	nucleus	51.14	50.53
Bra038839.1-P	Field mustard	nucleus	53.02	50.25
AT2G19090.1	Thale cress	nucleus	54.5	49.88
Bra038563.1-P	Field mustard	nucleus	53.56	49.2
Zm00001d046842_P001	Maize	nucleus	26.04	47.78
Zm00001d046839_P001	Maize	nucleus	26.04	47.78
Zm00001d012496_P001	Maize	nucleus	23.62	46.93
GSMUA_Achr7P04930_001	Banana	nucleus	37.32	46.88
GSMUA_Achr3P00490_001	Banana	nucleus	39.06	46.78
Zm00001d013369_P001	Maize	nucleus	33.69	41.35
OQU80872	Sorghum	nucleus	43.49	40.7
Zm00001d049762_P007	Maize	nucleus	43.22	40.4
Zm00001d031530_P006	Maize	nucleus	42.28	39.97
EES06355	Sorghum	cytosol	30.6	37.19
TraesCS7B01G137800.1	Wheat	nucleus	42.68	36.68
HORVU0Hr1G015650.2	Barley	cytosol, nucleus	21.61	36.43
TraesCS6B01G182400.1	Wheat	cytosol	30.47	36.26
Zm00001d053766_P001	Maize	cytosol	30.34	36.16
TraesCS6A01G154500.2	Wheat	cytosol	30.2	35.66
TraesCS6D01G144300.1	Wheat	cytosol	30.07	35.39
Os02t0175301-00	Rice	nucleus	17.58	34.93
TraesCS7D01G251500.1	Wheat	cytosol	42.42	34.92
TraesCS7A01G252800.1	Wheat	nucleus	39.73	34.58
Os02t0175200-00	Rice	cytosol, mitochondrion	14.23	33.65
HORVU7Hr1G052210.21	Barley	cytosol	37.72	33.41
KRH28815	Soybean	cytosol	17.85	29.42
KRG97595	Soybean	cytosol	22.28	25.11
KRH76635	Soybean	cytosol	20.81	24.8
KRG90664	Soybean	cytosol	25.64	24.77
KRH36090	Soybean	nucleus	25.37	24.64
KRH74089	Soybean	cytosol	25.64	24.39
KRH14687	Soybean	nucleus	25.5	24.27
KRH14028	Soybean	cytosol	23.62	24.01
KRH73448	Soybean	nucleus	25.1	23.88
KRH64648	Soybean	cytosol	26.71	23.78
KRH60958	Soybean	cytosol	20.94	23.57
KRH53256	Soybean	cytosol	26.58	23.52
KRG89850	Soybean	nucleus	24.3	23.09
KRH18693	Soybean	nucleus	24.83	22.98
KRH51633	Soybean	cytosol	20.27	22.74
KRH59380	Soybean	nucleus	22.42	22.72
KRH43215	Soybean	nucleus	22.55	22.67
KRH52653	Soybean	cytosol	20.54	21.52
KRH62002	Soybean	cytosol	19.87	21.17
KRH09858	Soybean	nucleus	20.67	20.7
KRH23466	Soybean	nucleus	20.13	20.03
KRH08031	Soybean	cytosol	11.41	19.45
KRH66512	Soybean	nucleus	19.6	18.27
KRH01066	Soybean	nucleus	17.45	17.83
KRH12768	Soybean	cytosol	14.9	17.68
KRH40173	Soybean	nucleus	18.12	17.58
KRH37731	Soybean	nucleus	14.23	16.46
KRH28816	Soybean	cytosol	0.4	9.09

Protein Annotations

EMBL:ACUP02010326	EnsemblPlants:KRH02818	EnsemblPlantsGene:GLYMA_17G060600	EntrezGene:100776480	InterPro:DUF630	InterPro:DUF632
PANTHER:PTHR21450	PANTHER:PTHR21450:SF3	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH02818	ProteinID:KRH02818.1
ProteinID:KRH02819.1	ProteinID:KRH02820.1	SEG:seg	UniParc:UPI000233E249	UniProt:K7MK60	MapMan:35.1

Description

hypothetical protein

Coordinates

chr17:+:4621223..4626027

Molecular Weight (calculated)

83881.0 Da

IEP (calculated)

4.784

GRAVY (calculated)

-0.629

Length

745 amino acids

Sequence
(BLAST)

001: MGCSQSKLDD EEAVKLCKDR KQFIKQAVEQ RAQYATGHVA YIQSLKRVSA ALLDYFKANE SRELSLDSFI TPPFTPVKKT SPAFIPISSK SFTPTTIEFG
101: PKTTLKVNYL RPSGNPAISV EERPRSPEMV RVESYSPMHQ FGIEGFFPMQ SSPVNPSIYS PHNRPNIPPP SPRSSQWDSF WNPFSSLDYY GYPTQSSLDW
201: TGTDDEIRGL RKVREEEGIP DLEEDETEQE EFAVKKNVAE ERAKIDVNPS KEEVTVADVD EHEEEEEEGT DAETGIANEV TDSQANGIEC FQVSKAQTTG
301: QEMETGNQEA KEETPGFTVY VNRRPTSMAE VIKDLEAQFT IICNAANDVS ALLEAKKAQY LSTSNELSAS KLLNPVALFR SASLHSSTSR FLMNSSNTRD
401: EDYEGPDDPS EEHCLFSVSH QSTLDRLYEW EKKLYEEVKS GERVRIAYEK KCQQLRNHDI NGEEPSSLDK TRAAIRDLHT QITVSIHSVE AISRRIETLR
501: DGELHPQLLE LVQGLAKMWK VMAECHQTQK RTLDEAKILL VDNDARKQCA TSRTDPQRLA HSASNLETEL RHWRNTFESW ITSQRSYINA LTGWLLRCVR
601: CEHDPSKLAC SPCRSSGTHP LFGLCVQWSR HLDALQETAV LDGIDFFAAG MGSLYAQQLR EETRRNPDGS KEHGENMEMV EVGQVEEVMN TEKLAEVAIK
701: VLCAGMSIAM SSMAEFAVDY AEGYTELAKK WEKVNLQQIS CGAGT

Best Arabidopsis Sequence Match ( AT4G30130.3 )
(BLAST)

001: MGCSHSKFDD DEAVQICKDR KRFIKQAVEH RTGFASGHIA YIQSLRKVSD ALREYIEGDE PHEFMLDTCV TPVKRMSSSG GFIEISPPSK MVQSEAESKL
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI

Arabidopsis Description

DUF630 family protein (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9SZW6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.