CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28816	Soybean	cytosol	5.49	72.73
KRH76635	Soybean	cytosol	56.98	39.84
PGSC0003DMT400009224	Potato	nucleus	35.01	38.73
VIT_04s0023g03760.t01	Wine grape	mitochondrion	48.97	34.13
CDX73734	Canola	nucleus	48.97	33.44
CDX77992	Canola	nucleus	48.05	33.39
Bra036821.1-P	Field mustard	nucleus	48.74	33.28
Solyc02g083610.2.1	Tomato	nucleus	47.83	32.81
GSMUA_Achr1P26500_001	Banana	cytosol	38.67	32.07
Os09t0538700-01	Rice	nucleus	46.0	30.78
TraesCS5D01G336000.1	Wheat	nucleus	46.22	30.38
KXG36086	Sorghum	nucleus	45.54	30.34
GSMUA_Achr3P00690_001	Banana	nucleus	35.01	30.18
Zm00001d022626_P001	Maize	nucleus	44.39	29.85
TraesCS5B01G330400.1	Wheat	nucleus	45.54	29.7
HORVU5Hr1G084030.15	Barley	nucleus	46.0	29.65
KRH28815	Soybean	cytosol	29.52	28.54
AT3G51290.2	Thale cress	cytosol	49.89	27.32
KRH01066	Soybean	nucleus	30.89	18.52
KRH12768	Soybean	cytosol	25.86	17.99
KRH37731	Soybean	nucleus	26.09	17.7
KRH40173	Soybean	nucleus	30.43	17.32
KRH66512	Soybean	nucleus	30.89	16.9
KRH62002	Soybean	cytosol	24.71	15.45
KRH52653	Soybean	cytosol	24.71	15.19
KRH09858	Soybean	nucleus	25.4	14.92
KRH23466	Soybean	nucleus	25.17	14.69
KRH36090	Soybean	nucleus	23.11	13.17
KRG90664	Soybean	cytosol	22.65	12.84
KRH19063	Soybean	nucleus	20.37	11.88
KRH02818	Soybean	nucleus	19.45	11.41
KRG97595	Soybean	cytosol	17.16	11.35
KRH60958	Soybean	cytosol	16.93	11.18
KRH51633	Soybean	cytosol	16.93	11.14
KRH12287	Soybean	nucleus	19.45	11.0
KRH37304	Soybean	nucleus	19.22	10.98
KRH14028	Soybean	cytosol	17.39	10.37
KRH43215	Soybean	nucleus	17.39	10.26
KRH59380	Soybean	nucleus	16.93	10.07
KRH74089	Soybean	cytosol	17.85	9.96
KRH14687	Soybean	nucleus	17.85	9.96
KRH18693	Soybean	nucleus	18.31	9.94
KRH64648	Soybean	cytosol	18.99	9.92
KRH53256	Soybean	cytosol	18.99	9.86
KRH73448	Soybean	nucleus	17.62	9.83
KRG89850	Soybean	nucleus	17.62	9.82

Protein Annotations

EMBL:ACUP02010134	EnsemblPlants:KRH08031	EnsemblPlantsGene:GLYMA_16G124600	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF23	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH08031	ProteinID:KRH08031.1
SEG:seg	UniParc:UPI0006EDCFC1	UniProt:A0A0R0G0D0	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr16:-:27416086..27419046

Molecular Weight (calculated)

50311.6 Da

IEP (calculated)

10.139

GRAVY (calculated)

-0.557

Length

437 amino acids

Sequence
(BLAST)

001: MGCCWHSRIA REETALSHCK ARKRCMKHFV EARHSFSSSH SMYIRSLHTT ASALVHFANT EEKEEKETVT LHHHSPTTSL PQPLPTSPVS DNALTVGLQV
101: FMFFVRSLCD IFLLAGCIAG KVYNYGWILN PLLRSRFSIR KRCKKFFGAI ADVNGSHCST VERLYTLEKK LCQEAKHHQA QNHILKQLED LNNTVPSTNP
201: TSEIHRKSTL QREVGIQQWH QSFGNIFKAH RDYIQSLTAW LRLNLHHFSR NPLNKSADES KIYTLCEQWN LALDHTPDKV ASKGIKSLLE DIHAIVVQQT
301: EEHKQKKKLD AALKELQKKV VQLQSIECKH GSRSMSESSD PKDRVTKKRA KVEHLRAKVE KEKTKHENSI GVTHRMTKKN LQMGFPQAFE GIVRFSSVCV
401: EVFESVYNKA NIDDVKRILP KENRHVSFIQ NRHFLIK

Best Arabidopsis Sequence Match ( AT3G51290.1 )
(BLAST)

001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGSMYESHQ VQTHIVQQLK
401: YLNTIPSTEP TSELHRQSTL QLELEVQQWH HSFCNLVKAQ RDYIQSLTGW LRLSLFQFSK NPLVRSSYES KIYSFCEEWH LAIDRIPDKV ASEGIKSFLT
501: AVHGIVAQQA DEHKQKKRTE SMLKDFEKKS ASLRALESKY SPYSVPESRK KNPVIEKRVK VEMLKGKAEE EKSKHEKSVS VTRAMTLNNL QMGFPHVFQA
601: MVGFSSVCMQ AFESVYNQAK SIGEDQEEVK RLLP

Arabidopsis Description

Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.