CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40173	Soybean	nucleus	95.34	90.49
CDX83412	Canola	nucleus	63.1	68.35
CDX95620	Canola	nucleus	63.37	66.47
CDY56992	Canola	nucleus	65.43	65.61
CDY42691	Canola	nucleus	64.88	65.42
CDX71821	Canola	nucleus	63.37	65.07
Bra007523.1-P	Field mustard	nucleus	63.65	64.18
CDY41178	Canola	nucleus	63.37	64.08
AT1G02110.1	Thale cress	nucleus	61.73	64.01
Bra014497.1-P	Field mustard	nucleus	66.8	63.91
KRH66512	Soybean	nucleus	68.72	62.7
AT3G60320.1	Thale cress	nucleus	67.9	62.19
Bra000365.1-P	Field mustard	nucleus	68.18	61.97
VIT_15s0021g01550.t01	Wine grape	nucleus	70.51	60.83
PGSC0003DMT400066867	Potato	nucleus	69.0	59.04
GSMUA_Achr11P...	Banana	nucleus	56.93	57.4
Solyc01g090270.2.1	Tomato	nucleus	67.49	56.16
GSMUA_Achr8P10940_001	Banana	nucleus	54.73	54.21
GSMUA_Achr4P21640_001	Banana	nucleus	50.07	52.14
Os10t0562700-01	Rice	nucleus	54.6	51.89
TraesCS1B01G231600.1	Wheat	nucleus	53.77	50.98
TraesCS1D01G219800.1	Wheat	nucleus	53.91	50.97
EER94480	Sorghum	nucleus	54.73	50.83
TraesCS1A01G218200.1	Wheat	nucleus	53.5	50.72
Zm00001d029946_P003	Maize	nucleus	54.18	50.71
Zm00001d000039_P001	Maize	nucleus	53.22	49.68
Zm00001d017461_P001	Maize	cytosol, plastid	29.63	39.34
Zm00001d051338_P002	Maize	nucleus	29.36	39.05
KRH76635	Soybean	cytosol	33.33	38.88
TraesCS6D01G225400.1	Wheat	cytosol, mitochondrion	29.63	38.43
Os02t0654600-00	Rice	nucleus	31.41	38.36
HORVU6Hr1G062350.2	Barley	plastid	30.04	38.35
TraesCS6B01G281100.1	Wheat	mitochondrion, plastid	29.77	38.07
KXG31098	Sorghum	cytosol, plastid	30.18	38.0
TraesCS6A01G243100.1	Wheat	mitochondrion	29.36	37.81
KRH28815	Soybean	cytosol	22.91	36.95
KRH08031	Soybean	cytosol	18.52	30.89
KRH12768	Soybean	cytosol	23.59	27.39
KRH37731	Soybean	nucleus	22.5	25.47
KRH28816	Soybean	cytosol	1.1	24.24
KRH62002	Soybean	cytosol	23.18	24.18
KRH52653	Soybean	cytosol	23.05	23.63
KRH09858	Soybean	nucleus	23.46	22.98
KRH23466	Soybean	nucleus	23.59	22.96
KRH60958	Soybean	cytosol	17.97	19.79
KRG90664	Soybean	cytosol	20.85	19.71
KRH36090	Soybean	nucleus	20.71	19.69
KRH53256	Soybean	cytosol	22.63	19.6
KRH64648	Soybean	cytosol	22.5	19.59
KRG97595	Soybean	cytosol	17.42	19.21
KRH51633	Soybean	cytosol	17.15	18.83
KRH74089	Soybean	cytosol	20.16	18.77
KRH14028	Soybean	cytosol	18.52	18.42
KRH14687	Soybean	nucleus	19.07	17.75
KRH73448	Soybean	nucleus	18.93	17.62
KRH59380	Soybean	nucleus	17.7	17.55
KRH02818	Soybean	nucleus	17.83	17.45
KRH43215	Soybean	nucleus	17.56	17.27
KRH18693	Soybean	nucleus	19.07	17.27
KRH19063	Soybean	nucleus	17.7	17.22
KRG89850	Soybean	nucleus	18.52	17.22
KRH12287	Soybean	nucleus	18.24	17.21
KRH37304	Soybean	nucleus	17.83	16.99

Protein Annotations

EMBL:ACUP02011499	EnsemblPlants:KRH01066	EnsemblPlantsGene:GLYMA_18G251900	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF9	PFAM:PF04782	PFAM:PF04783	ProteinID:KRH01066	ProteinID:KRH01066.1
SEG:seg	UniParc:UPI0006EDC087	UniProt:A0A0R0F4L3	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr18:-:53855786..53862322

Molecular Weight (calculated)

82004.5 Da

IEP (calculated)

6.820

GRAVY (calculated)

-0.689

Length

729 amino acids

Sequence
(BLAST)

001: MGCTASKLEN EDTVRRCKER RRLMKEAVYA RHHLAAAHSD YCRSLRLTGS ALSTFSAGEP LSVSDHTPAV FLNNSQHHPP PPQHQPSPSP SPPPPPFFFP
101: TAHSTYSSTP SQTSSVWNWE NFYPPPPPPA SDYFPEQPQK FSHTQTQTPS HYSHKTQTPS HYSHKTQQRT NPQIHDTDSE RSEYDFFDGK HETENEKTDS
201: HHLPEEYTET EREEVQCSEW GDHYSTTSSS DDDGVEGDVE SRSEIGTRSN FGSSVRAESV VGVGGGGGAK RFDAASSVAA AEMKMVVRHR DLREIVEAIK
301: ENFDNAASAG DQVSEMLEIS RAQLDRSFKQ LRKTVYHSSS ILSNLSSSWT SKPPLAVKYR LDTGSLDEPG GPKSLCSTLE RLLAWEKKLY EEVKAREGVK
401: IEHEKKLSAL QTQEYKGEDE AKIFKTKASI NRLQSLIAVT SQAVSTTSTA TIGLRDSDLV PQLVDLIHGF MYMWRSMHHY HEIQSNIVQQ VRGLVNRSSR
501: GDSTSELHRQ ATRDLESAVS AWHSSFCRLI KFQRDFILSL HGWFKLSLVP VHNDNINSRE TSDTYQFFDE WKLALDRVPD TVASEAIKSF INVVHVISSK
601: QVEELKIKKR TETASKELEK KASSLRNLER KFYSSYSMVG ISLPDSAPDN GQVLDARDPL AEKKLELATC QRRVEDEMLR HSKAVEVTRA MTLNNLQTGL
701: PGVFQALTSF SSLFTEALES VCTRSYAIK

Best Arabidopsis Sequence Match ( AT1G02110.1 )
(BLAST)

001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN

Arabidopsis Description

BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.