Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 96.29 | 96.98 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 95.05 | 94.39 |
| HORVU6Hr1G062350.2 | Barley | plastid | 89.75 | 88.97 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 65.02 | 67.03 |
| Os02t0654600-00 | Rice | nucleus | 70.49 | 66.83 |
| KXG31098 | Sorghum | cytosol, plastid | 66.61 | 65.11 |
| Zm00001d051338_P002 | Maize | nucleus | 61.66 | 63.69 |
| CDX83412 | Canola | nucleus | 36.04 | 30.31 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 40.28 | 29.65 |
| KRH01066 | Soybean | nucleus | 37.81 | 29.36 |
| CDY56992 | Canola | nucleus | 37.46 | 29.16 |
| CDY42691 | Canola | nucleus | 36.93 | 28.91 |
| CDX95620 | Canola | nucleus | 35.34 | 28.78 |
| CDX71821 | Canola | nucleus | 36.04 | 28.73 |
| AT1G02110.1 | Thale cress | nucleus | 35.34 | 28.45 |
| CDY41178 | Canola | nucleus | 36.22 | 28.43 |
| Bra007523.1-P | Field mustard | nucleus | 36.22 | 28.35 |
| Bra014497.1-P | Field mustard | nucleus | 37.28 | 27.69 |
| KRH40173 | Soybean | nucleus | 37.28 | 27.47 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 39.75 | 26.63 |
| Bra000365.1-P | Field mustard | nucleus | 37.46 | 26.43 |
| AT3G60320.1 | Thale cress | nucleus | 36.4 | 25.88 |
| KRH66512 | Soybean | nucleus | 36.04 | 25.53 |
| PGSC0003DMT400066867 | Potato | nucleus | 37.81 | 25.12 |
| Solyc01g090270.2.1 | Tomato | nucleus | 36.4 | 23.52 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 24.03 | 19.51 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 24.38 | 18.47 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 16.08 | 16.76 |
| TraesCS3A01G198900.1 | Wheat | nucleus | 23.85 | 16.65 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 21.2 | 16.46 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 22.97 | 16.39 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 17.84 | 16.01 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 20.49 | 15.76 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 19.08 | 15.19 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 20.14 | 14.94 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 19.08 | 14.19 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 18.37 | 14.05 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 21.91 | 13.9 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 19.43 | 13.5 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 18.55 | 12.27 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 20.14 | 11.89 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 18.55 | 11.19 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G243100.1 | EnsemblPlantsGene:TraesCS6A01G243100 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF11 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr6A:-:454679847..454681656
Molecular Weight (calculated)
61700.6 Da
IEP (calculated)
10.026
GRAVY (calculated)
-0.387
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMAWSRQQG DAARPAAREH TRRCRERRRL MREAVRARRQ LAASHAGYLG SLGLVASALT HFALGEPLPV SDHTPPAVLV HRPAPAPSTP PPLLRSIQPA
101: QQDGAAAAAA EAPPAAARTE GGVVGGEDLR VAVRHRSLAE VAAGLEEYFL RATAAGDPVS KLLEAGNAEY SGGASSFFGV LCCMSSSSSP SVSHDGVDGM
201: HDRIGKRHSS TLQQLMVWEK KLYKEVKARE RLQVRHDKKL AALRDQEYSR KINVDIQKLK GAWDRARAQL ATASEAAHAG SAAISELRDT HLARQVLGLC
301: HATRDMWKAM RQHHEAQCLI AQQLRGLSGR TSMDATTEIQ HGATRALEAA MSAWCAALGH LAKHQRDYVA ALHGWLKLTL APSADGAPAS PVAAELAAFV
401: DRWRQALDGV HCAEVLKSIK NFAGATHALY AHQGDELRAA RRVAQCTREL DRKSRMLRQV EKSHYDSYAP AGLALWNRGR HWMEHDMRQV HHAHNEVVQR
501: KEEIDACRRK LEGEMKRHAM AIDATRSSAV AGVQRTLPAV FQAMATFSAS LATALDAVCR HGSDVQ
101: QQDGAAAAAA EAPPAAARTE GGVVGGEDLR VAVRHRSLAE VAAGLEEYFL RATAAGDPVS KLLEAGNAEY SGGASSFFGV LCCMSSSSSP SVSHDGVDGM
201: HDRIGKRHSS TLQQLMVWEK KLYKEVKARE RLQVRHDKKL AALRDQEYSR KINVDIQKLK GAWDRARAQL ATASEAAHAG SAAISELRDT HLARQVLGLC
301: HATRDMWKAM RQHHEAQCLI AQQLRGLSGR TSMDATTEIQ HGATRALEAA MSAWCAALGH LAKHQRDYVA ALHGWLKLTL APSADGAPAS PVAAELAAFV
401: DRWRQALDGV HCAEVLKSIK NFAGATHALY AHQGDELRAA RRVAQCTREL DRKSRMLRQV EKSHYDSYAP AGLALWNRGR HWMEHDMRQV HHAHNEVVQR
501: KEEIDACRRK LEGEMKRHAM AIDATRSSAV AGVQRTLPAV FQAMATFSAS LATALDAVCR HGSDVQ
001: MGCTASKLDS EDAVRRCKER RRLMKDAVYA RHHLAAAHSD YCRSLRLTGS ALSSFAAGEP LSVSENTPAV FLRPSSSQDA PRVPSSHSPE PPPPPIRSKP
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN
101: KPTRPRRLPH ILSDSSPSSS PATSFYPTAH QNSTYSRSPS QASSVWNWEN FYPPSPPDSE YFERKARQNH KHRPPSDYDA ETERSDHDYC HSRRDAAEEV
201: HCSEWGDDHD RFTATSSSDG DGEVETHVSR SGIEEEPVKQ PHQDPNGKEH SDHVTTSSDC YKTKLVVRHK NLKEILDAVQ DYFDKAASAG DQVSAMLEIG
301: RAELDRSFSK LRKTVYHSSS VFSNLSASWT SKPPLAVKYK LDASTLNDEQ GGLKSLCSTL DRLLAWEKKL YEDVKAREGV KIEHEKKLSA LQSQEYKGGD
401: ESKLDKTKTS ITRLQSLIIV SSEAVLTTSN AILRLRDTDL VPQLVELCHG LMYMWKSMHE YHEIQNNIVQ QVRGLINQTE RGESTSEVHR QVTRDLESAV
501: SLWHSSFCRI IKFQREFICS LHAWFKLSLV PLSNGDPKKQ RPDSFALCEE WKQSLERVPD TVASEAIKSF VNVVHVISIK QAEEVKMKKR TESAGKELEK
601: KASSLRSIER KYYQAYSTVG IGPGPEVLDS RDPLSEKKCE LAACQRQVED EVMRHVKAVE VTRAMTLNNL QTGLPNVFQA LTSFSSLFTE SLQTVCSRSY
701: SIN
Arabidopsis Description
BZIP domain class transcription factor (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q56W45]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.