CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051338_P002	Maize	nucleus	80.48	85.04
Os02t0654600-00	Rice	nucleus	72.54	70.35
TraesCS6D01G225400.1	Wheat	cytosol, mitochondrion	65.28	67.26
HORVU6Hr1G062350.2	Barley	plastid	66.32	67.25
TraesCS6A01G243100.1	Wheat	mitochondrion	65.11	66.61
TraesCS6B01G281100.1	Wheat	mitochondrion, plastid	65.28	66.32
CDX83412	Canola	nucleus	35.75	30.76
KRH01066	Soybean	nucleus	38.0	30.18
CDY42691	Canola	nucleus	37.65	30.15
CDY56992	Canola	nucleus	37.65	29.99
CDX95620	Canola	nucleus	35.58	29.64
EER94480	Sorghum	nucleus	40.07	29.55
AT1G02110.1	Thale cress	nucleus	34.89	28.73
KRH40173	Soybean	nucleus	38.0	28.65
Bra014497.1-P	Field mustard	nucleus	37.48	28.48
CDX71821	Canola	nucleus	34.89	28.45
CDY41178	Canola	nucleus	35.23	28.29
Bra007523.1-P	Field mustard	nucleus	35.23	28.22
AT3G60320.1	Thale cress	nucleus	36.79	26.76
VIT_15s0021g01550.t01	Wine grape	nucleus	39.03	26.75
Bra000365.1-P	Field mustard	nucleus	36.79	26.56
KRH66512	Soybean	nucleus	36.27	26.28
PGSC0003DMT400066867	Potato	nucleus	37.65	25.59
Solyc01g090270.2.1	Tomato	nucleus	36.61	24.2
KXG36086	Sorghum	nucleus	26.77	23.63
OQU88702	Sorghum	cytosol	16.23	21.32
EES00973	Sorghum	nucleus	22.11	18.23
EES18173	Sorghum	nucleus	23.66	17.86
KXG32552	Sorghum	nucleus	24.01	17.64
EES06355	Sorghum	cytosol	18.13	17.13
EER97113	Sorghum	cytosol	20.73	16.57
EES08807	Sorghum	nucleus	19.0	15.3
OQU80872	Sorghum	nucleus	19.86	14.45
OQU85656	Sorghum	cytosol	18.65	14.1
EES19545	Sorghum	nucleus	21.59	13.86
KXG34164	Sorghum	plastid	21.93	13.69
KXG39486	Sorghum	nucleus	18.83	13.13
EER97130	Sorghum	nucleus	18.31	11.61
KXG26898	Sorghum	cytosol	15.89	11.6

Protein Annotations

EnsemblPlants:KXG31098	EnsemblPlantsGene:SORBI_3004G297200	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF11	PFAM:PF04782	PFAM:PF04783	ProteinID:KXG31098	ProteinID:KXG31098.1	ProteinID:KXG31142.2
SEG:seg	UniParc:UPI0007F20945	UniProt:A0A194YSH5	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:63675533..63677913

Molecular Weight (calculated)

63768.1 Da

IEP (calculated)

9.995

GRAVY (calculated)

-0.404

Length

579 amino acids

Sequence
(BLAST)

001: MGAASSREAD AARAAAREHT KRCRERRRLM REAVRLRRHL AASHAAYLRS LGVVASALTR FAVGEPLPVS DHTPPAVIAH RAVVVPSSPP PLLRAMEQPQ
101: PQGEARQQEV GSGVSADVGV GVAAPTRTEG VGVGGGAEEE LRMVVRHRSL AEVAAGLEEY FVKASVAGDT VSSLLEANTT EFKGGSHSFL GALCCLSAPP
201: LDRIDSMSSR QRHSATLQQL LAWEKKLYKD VKDREKLQIR HDKKLAELRD QEYSRKIDVD IQKLKAAWDR ARAQLETASE SVDATSSAVA QLRDTHLARQ
301: LLELCHAALD MWRAMRQHHE AQSLFAQQLR GLSSRTSMEP TTEIHHQATR ALEAAMNAWS AAMAHMAKHQ RDYVHAIGGW LKLTLTPTPV NGAAEASSSA
401: STVAAELAAF VDRWGKVLDR VHCVDVLKAI KSFAGAARAI HALQGDELRV ARRVRQYSRE LDRKSRMLRQ VEKSYYDSYL PGVMSMWHWG RPAWRDHMQA
501: RDAGDEVAQR RDEIAACRKM VEDEMRRHAK AIDATRTATV TGVQGKLPAV FQAMAAFSAS LANSLEAACR APQQNTNMQ

Best Arabidopsis Sequence Match ( AT3G60320.1 )
(BLAST)

001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK

Arabidopsis Description

NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.