Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066867 | Potato | nucleus | 94.29 | 96.95 |
| CDX83412 | Canola | nucleus | 52.05 | 67.76 |
| KRH01066 | Soybean | nucleus | 56.16 | 67.49 |
| CDX95620 | Canola | nucleus | 52.51 | 66.19 |
| CDX71821 | Canola | nucleus | 52.4 | 64.65 |
| KRH40173 | Soybean | nucleus | 56.62 | 64.58 |
| VIT_15s0021g01550.t01 | Wine grape | nucleus | 61.64 | 63.91 |
| CDY42691 | Canola | nucleus | 52.74 | 63.9 |
| CDY41178 | Canola | nucleus | 52.51 | 63.8 |
| CDY56992 | Canola | nucleus | 52.85 | 63.69 |
| Bra007523.1-P | Field mustard | nucleus | 52.4 | 63.49 |
| AT1G02110.1 | Thale cress | nucleus | 50.46 | 62.87 |
| Bra000365.1-P | Field mustard | nucleus | 57.42 | 62.72 |
| AT3G60320.1 | Thale cress | nucleus | 56.51 | 62.19 |
| Bra014497.1-P | Field mustard | nucleus | 53.77 | 61.81 |
| KRH66512 | Soybean | nucleus | 54.45 | 59.7 |
| GSMUA_Achr11P... | Banana | nucleus | 46.92 | 56.85 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 44.75 | 56.0 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 45.55 | 54.21 |
| Os10t0562700-01 | Rice | nucleus | 46.8 | 53.45 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 46.23 | 52.53 |
| TraesCS1B01G231600.1 | Wheat | nucleus | 46.0 | 52.41 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 45.89 | 52.28 |
| Zm00001d029946_P003 | Maize | nucleus | 46.0 | 51.73 |
| EER94480 | Sorghum | nucleus | 46.12 | 51.47 |
| Zm00001d000039_P001 | Maize | nucleus | 45.32 | 50.83 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 24.09 | 38.43 |
| Solyc02g083610.2.1 | Tomato | nucleus | 27.74 | 38.15 |
| HORVU6Hr1G062350.2 | Barley | plastid | 24.2 | 37.13 |
| Zm00001d051338_P002 | Maize | nucleus | 23.06 | 36.86 |
| Os02t0654600-00 | Rice | nucleus | 25.11 | 36.85 |
| KXG31098 | Sorghum | cytosol, plastid | 24.2 | 36.61 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 23.4 | 36.48 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 23.52 | 36.4 |
| TraesCS6B01G281100.1 | Wheat | mitochondrion, plastid | 23.63 | 36.32 |
| Solyc03g120140.2.1 | Tomato | cytosol | 8.9 | 27.18 |
| Solyc08g068100.2.1 | Tomato | cytosol | 20.21 | 24.41 |
| Solyc01g111740.2.1 | Tomato | cytosol | 20.21 | 24.28 |
| Solyc04g054880.2.1 | Tomato | nucleus | 17.12 | 20.92 |
| Solyc10g074470.1.1 | Tomato | cytosol | 17.24 | 18.8 |
| Solyc07g047830.2.1 | Tomato | nucleus | 16.32 | 18.74 |
| Solyc09g007100.2.1 | Tomato | nucleus | 15.75 | 18.06 |
| Solyc01g112050.2.1 | Tomato | nucleus | 17.01 | 16.74 |
| Solyc06g060270.2.1 | Tomato | nucleus | 19.29 | 16.67 |
Protein Annotations
| EnsemblPlants:Solyc01g090270.2.1 | EnsemblPlantsGene:Solyc01g090270.2 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF9 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI0002761D61 | UniProt:K4AYW8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:83931516..83937311
Molecular Weight (calculated)
98102.2 Da
IEP (calculated)
6.919
GRAVY (calculated)
-0.722
Length
876 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASKLDN EDTVRRCKDR RRLMKEAVYA RHHLAAAHSD YCRSLRVTGS ALSTFAAGEP LSVSDHTPAV LLRTSFSTTA ATNIKTPPPP PPIHIPSPSP
101: SLHLPPPPPP FFPSPSPTIA SSKLPHILSA SSVSSHQRQP PVQQKKPLKL PHILSGSSLN SYNEDYTYDA KANSTYSSTP SQASSVWNWE NFYPPSPPSS
201: EYFERVHNKN NFSREADPED DEEDKASNYT SHSQYSQHHH QQQQHQHHPS DQSLHGKSNK QFDFFDTDSI NDEKLANGSV RNQKKVGENK QNYAAHHLNN
301: WESEAEREEV QCSEWGDHDH YSTTTSSDDD DDEEEEVEEK DDIRSGYGPS RSNFGSTASV KNEEGSNINV NSKNFSVKKS DKMSEDGGSS SMSWGNGNGK
401: VEMVSDRSIV VRHKDLAEIV AAIKEHFDKT ASAGEQVSEM LETGRAQLDR SFKQLKKTVY HSGGVFSTIS STWSSKPPLA VKYRFEPSSI DEGGQKSLCS
501: TLERLLAWEK KLYQEVKARE GVKIEHEKKL ATLQSQESRS DDIAKLDKTK ASITRLQSLM VVTSQAVSTT SSAIIGLRDS DLVPQLVELC HGFMYMWKSM
601: NQFHQVQNDI VQQVRGLINR EIKGQSTSDL HRQATRDLES AVSAWHSSYC RLIKFQRDFI RSLHGWFKLT LVSVNTEPTN GNREFSDSFM FCDEWKLALD
701: RIPDTVASEA IKSFINVVHS IYVKQTEELK IKKRTESASK ELEKKASSVR NIERKYYNSF SMVGIGLPDG GPDNGNILDV RDPLAEKKAE LAASQRRVED
801: EMVKHSKAVE VTRAMTLNNI QTGLPGVFQA MTSFSSLMTE ALEAFKSEFW LKTAAETAVQ VNNVKANIKI QIYVSL
101: SLHLPPPPPP FFPSPSPTIA SSKLPHILSA SSVSSHQRQP PVQQKKPLKL PHILSGSSLN SYNEDYTYDA KANSTYSSTP SQASSVWNWE NFYPPSPPSS
201: EYFERVHNKN NFSREADPED DEEDKASNYT SHSQYSQHHH QQQQHQHHPS DQSLHGKSNK QFDFFDTDSI NDEKLANGSV RNQKKVGENK QNYAAHHLNN
301: WESEAEREEV QCSEWGDHDH YSTTTSSDDD DDEEEEVEEK DDIRSGYGPS RSNFGSTASV KNEEGSNINV NSKNFSVKKS DKMSEDGGSS SMSWGNGNGK
401: VEMVSDRSIV VRHKDLAEIV AAIKEHFDKT ASAGEQVSEM LETGRAQLDR SFKQLKKTVY HSGGVFSTIS STWSSKPPLA VKYRFEPSSI DEGGQKSLCS
501: TLERLLAWEK KLYQEVKARE GVKIEHEKKL ATLQSQESRS DDIAKLDKTK ASITRLQSLM VVTSQAVSTT SSAIIGLRDS DLVPQLVELC HGFMYMWKSM
601: NQFHQVQNDI VQQVRGLINR EIKGQSTSDL HRQATRDLES AVSAWHSSYC RLIKFQRDFI RSLHGWFKLT LVSVNTEPTN GNREFSDSFM FCDEWKLALD
701: RIPDTVASEA IKSFINVVHS IYVKQTEELK IKKRTESASK ELEKKASSVR NIERKYYNSF SMVGIGLPDG GPDNGNILDV RDPLAEKKAE LAASQRRVED
801: EMVKHSKAVE VTRAMTLNNI QTGLPGVFQA MTSFSSLMTE ALEAFKSEFW LKTAAETAVQ VNNVKANIKI QIYVSL
001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK
Arabidopsis Description
NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.