Factsheet for Bra007523.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41178	Canola	nucleus	98.76	99.03
Bra014497.1-P	Field mustard	nucleus	79.94	75.85
AT3G60320.1	Thale cress	nucleus	81.19	73.74
Bra000365.1-P	Field mustard	nucleus	76.35	68.83
KRH01066	Soybean	nucleus	64.18	63.65
KRH40173	Soybean	nucleus	65.01	61.2
VIT_15s0021g01550.t01	Wine grape	nucleus	66.25	56.69
KRH66512	Soybean	nucleus	61.83	55.94
GSMUA_Achr11P...	Banana	nucleus	55.33	55.33
PGSC0003DMT400066867	Potato	nucleus	64.87	55.05
Os10t0562700-01	Rice	nucleus	56.29	53.06
GSMUA_Achr8P10940_001	Banana	nucleus	53.53	52.58
Zm00001d029946_P003	Maize	nucleus	56.57	52.5
Solyc01g090270.2.1	Tomato	nucleus	63.49	52.4
GSMUA_Achr4P21640_001	Banana	nucleus	50.62	52.29
EER94480	Sorghum	nucleus	56.29	51.85
TraesCS1D01G219800.1	Wheat	nucleus	54.63	51.23
Zm00001d000039_P001	Maize	nucleus	55.33	51.22
TraesCS1B01G231600.1	Wheat	nucleus	54.36	51.11
TraesCS1A01G218200.1	Wheat	nucleus	54.36	51.11
TraesCS6A01G243100.1	Wheat	mitochondrion	28.35	36.22
TraesCS6D01G225400.1	Wheat	cytosol, mitochondrion	28.08	36.12
HORVU6Hr1G062350.2	Barley	plastid	28.49	36.08
Zm00001d017461_P001	Maize	cytosol, plastid	27.39	36.07
TraesCS6B01G281100.1	Wheat	mitochondrion, plastid	28.35	35.96
Os02t0654600-00	Rice	nucleus	29.18	35.34
Bra036821.1-P	Field mustard	nucleus	31.26	35.31
KXG31098	Sorghum	cytosol, plastid	28.22	35.23
Zm00001d051338_P002	Maize	nucleus	26.56	35.04
Bra022983.1-P	Field mustard	cytosol	26.69	28.01
Bra009853.1-P	Field mustard	nucleus	23.79	23.4
Bra012035.1-P	Field mustard	nucleus	19.64	19.69
Bra011166.1-P	Field mustard	nucleus	17.98	19.61
Bra018963.1-P	Field mustard	nucleus	20.19	19.47
Bra011832.1-P	Field mustard	nucleus	17.57	18.49
Bra020807.1-P	Field mustard	nucleus	18.4	17.43
Bra002985.1-P	Field mustard	nucleus	17.29	17.27
Bra009665.1-P	Field mustard	cytosol	16.87	17.26
Bra011597.1-P	Field mustard	nucleus	19.92	17.22
Bra015667.1-P	Field mustard	nucleus	19.5	16.89
Bra038839.1-P	Field mustard	nucleus	17.84	16.41
Bra038563.1-P	Field mustard	nucleus	18.26	16.28
Bra017947.1-P	Field mustard	nucleus	19.92	15.7
Bra025823.1-P	Field mustard	peroxisome	18.4	11.59

Protein Annotations

EnsemblPlants:Bra007523.1	EnsemblPlants:Bra007523.1-P	EnsemblPlantsGene:Bra007523	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF9	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002542FC2
UniProt:M4CTI0	MapMan:35.1	:	:	:	:

Description

AT3G60320 (E=2e-127) | DNA binding

Coordinates

chrA09:-:29605874..29608601

Molecular Weight (calculated)

81242.1 Da

IEP (calculated)

7.720

GRAVY (calculated)

-0.732

Length

723 amino acids

Sequence
(BLAST)

001: MGCTASKLDG EDTVRRYKTR RRLMKEAVYA RHSLAAAQAD YCRSLRLTGS ALSSFAAGEP LSVSYQTPAV FLHHPPPSEP SPTNSIPPPP PPPPQPPVIS
101: ASSSRRRRQQ QHQQRPKLPH ILSDSSPSSS PASERSNFYP RAYQNSTYSA TPSHASSVWN WENFYPPSPP DSEFFDKKAQ EETLKQRETE RTEHASKKKN
201: SVVDEEETER EEVQCGSWDV QDHYITTSSS SSEEDDNMES VSEVGTKVRA SKRHNQQASP MPREYADDKA DDATTFSGSY RGGGGDVAVR HRDLKEIADA
301: IKEYFDKAAA AGDQVSQMLE LGRAQLDGSF RQLKKTVIHS SSILSNLSST WTSKPPLAVK YRLDTTALDQ PNSLKSLCST LDRLLAWEKK LYEEIKAREG
401: VKIEHEKKLS QLQSQEYKGE DAAKLDKTKA SINRLQSLII VTSEAVTTTS TAIIRLRDTD LVPQLVELCH GFMYMWKAMH QFHETQNSIV QQVKGLIDRS
501: GKGESTSELH RQATRDLESA VSSWHSSFSH LIEFQRDFIR SVHAWFKLTI LNKDPTDAYS FCEEWKLALD RVPDTVASEA IKSFINVVHV ISTKQGDEHK
601: VKKRTETASK ELEKKASSLR SLERKYYQSY SMVGVGLPES GPDSQHVLDA RDPLREKKTE LAGCQRRVEE EMVKHSKEVE VTRAMTLNNL QTGLPGVFQA
701: LTSFSGLFVE SLETVCTRSH SIK

Best Arabidopsis Sequence Match ( AT3G60320.1 )
(BLAST)

001: MGCAASKLDN EDAVRRCKDR RRLMKEAVYA RHHLAAAHAD YCRSLRITGS ALSSFASGEP LSVSDQTPAV FLHTPPPPLS EQSPAKFVPP RFSPSPAPSS
101: VYPPSTSPSV ASSKQPSVMS TSSNRRRKQQ PKPRLPHILS ESSPSSSPRS ERSNFMPNLY PSAYQNSTYS ATPSHASSVW NWENFYPPSP PDSEFFNRKA
201: QEKKHNSDNR FNDEDTETVR SEYDFFDTRK QKQKQFESMR NQVEEETETE REEVQCSEWE DHDHYSTTSS SDAAEEEEED DDRESISEVG TRSEFGSTVR
301: SNSMRRHHQQ PSPMPQVYGG AEQSKYDKAD DATISSGSYR GGGDIADMKM VVRHRDLKEI IDAIKENFDK AAASGEQVSQ MLELGRAELD RSFSQLKKTV
401: IHSSSLLSNL SSTWTSKPPL AVKYRIDTTA LDQPNSSKSL CSTLDRLLAW EKKLYEEIKA REGFKIEHEK KLSQLQSQEY KGEDEAKLDK TKASITRLQS
501: LIIVTSQAVT TTSTAIIRLR DTDLVPQLVE LCHGFMYMWK SMHQYHETQN SIVEQVRGLI NRSGKGESTS ELHRQATRDL ESAVSSWHSS FSSLIKFQRD
601: FIHSVHAWFK LTLLPVCQED AANHHKEPLD AYAFCDEWKL ALDRIPDTVA SEAIKSFINV VHVISAKQAD EHKIKKRTES ASKELEKKAS SVRNLERKYY
701: QSYSMVGVGL PESGPDNQHM LDARDPLSDK KSELAVCQRR VEEEMVKYSK AIEVTRAMTL NNLQTGLPGV FQSLTSFSAL FMESLQTVCT RSYSIK

Arabidopsis Description

NRG2Nitrate regulatory gene2 protein [Source:UniProtKB/Swiss-Prot;Acc:Q93YU8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.