Factsheet for Bra018963.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52975	Canola	nucleus	98.8	99.2
AT1G52320.5	Thale cress	nucleus	81.87	76.94
Solyc03g120140.2.1	Tomato	cytosol	22.4	58.54
VIT_09s0002g04590.t01	Wine grape	nucleus	46.67	57.19
KRH09858	Soybean	nucleus	50.4	50.81
KRH23466	Soybean	nucleus	50.0	50.07
OQU88702	Sorghum	cytosol	28.8	48.98
Bra009853.1-P	Field mustard	nucleus	45.87	46.8
TraesCS2B01G181100.1	Wheat	nucleus	38.67	40.11
TraesCS2D01G161700.1	Wheat	nucleus	38.8	40.03
TraesCS2A01G155900.1	Wheat	nucleus	38.53	39.64
Os07t0211900-01	Rice	plasma membrane	37.73	38.4
Zm00001d019173_P001	Maize	nucleus	35.87	36.25
Bra036821.1-P	Field mustard	nucleus	21.07	24.69
Bra022983.1-P	Field mustard	cytosol	18.67	20.32
Bra007523.1-P	Field mustard	nucleus	19.47	20.19
Bra000365.1-P	Field mustard	nucleus	21.07	19.7
Bra014497.1-P	Field mustard	nucleus	19.73	19.42
Bra011166.1-P	Field mustard	nucleus	16.93	19.16
Bra011832.1-P	Field mustard	nucleus	16.67	18.2
Bra012035.1-P	Field mustard	nucleus	17.07	17.75
Bra009665.1-P	Field mustard	cytosol	16.67	17.68
Bra020807.1-P	Field mustard	nucleus	17.6	17.3
Bra038839.1-P	Field mustard	nucleus	16.8	16.03
Bra011597.1-P	Field mustard	nucleus	17.47	15.67
Bra038563.1-P	Field mustard	nucleus	16.93	15.66
Bra017947.1-P	Field mustard	nucleus	18.8	15.38
Bra015667.1-P	Field mustard	nucleus	16.93	15.21
Bra002985.1-P	Field mustard	nucleus	12.27	12.71
Bra025823.1-P	Field mustard	peroxisome	15.47	10.1

Protein Annotations

EnsemblPlants:Bra018963.1	EnsemblPlants:Bra018963.1-P	EnsemblPlantsGene:Bra018963	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0016020	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450	PANTHER:PTHR21450:SF22
PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI000253E901	UniProt:M4DR20	MapMan:35.1

Description

AT1G52320 (E=4e-244) | unknown protein

Coordinates

chrA06:-:997099..1000156

Molecular Weight (calculated)

85202.2 Da

IEP (calculated)

5.987

GRAVY (calculated)

-0.895

Length

750 amino acids

Sequence
(BLAST)

001: MGCAQSKIEN EEAVTRCKER KQFMKDAVVA PSSPLPAAVS PPPPSSAAVI SNSAASSSSA ADISQPMPDT LPPPPPPPPL PLQRAATMPE MNGRSGGPPG
101: SGLSGTIIEE DDDGDDDSEV ENHDRLVRKS KSRGGSSRGR PMIDDDRHHH HNQEAPPPPL PQSMAANQRQ VPPPRQHQQQ EHLVYDYFFA SENIPGTTLE
201: DTPPPPQAKP APPQPASPST DEDDELEDEE EEEEDEPVVE RKPPVVVEER PKRVEEPSVE LEKVANFRGM KKPIGGERRG GGRFPATATN LGNVFNELDD
301: NFLKASESAH EVSKMLEATR LHYHSNFADN RGHIDHSARV MRVITWNRSF RGLPNADVGK DDFDSEENET HATVLDKLLA WEKKLYDEVK SGELMKIEYQ
401: RKVAHLNRVK KRGGHSDSLE RAKAAVSQLH TRYIVDMQSM DSTVSEINRL RDEQLYVKLL HLVEAMGKMW EMMQMHHQRQ AEISKVLRSL DISQAVKETN
501: DHHHERTIQL LAVVQEWHTQ FCRMIDNQKM YIKSLGGWLK LNLIPIESTL KEKVSSPPRV PNPAIQKLLH VWYDRLDKIP DEMARTAIIN FAAVVSTIMQ
601: QQEEEMKLRD RCEETRKELG RKIRQFEDWY HKYMQKRGPE DMNAEGSEGD NEHKDEVVVR QFNVEQIKKR LEEEEEAYQR QSQQVREKSI ASLRTRLPEL
701: FQAMSEVAYS CSGMYRAVVA YVTQRQSQSE RHQKPPSQGQ TSVRTDVRAE

Best Arabidopsis Sequence Match ( AT1G52320.5 )
(BLAST)

001: MGCAQSKIEN EEAVTRCKER KQLMKDAVTA RNAFAAAHSA YAMALKNTGA ALSDYSHGEF LVSNHSSSSA AAAIASTSSL PTAISPPLPS STAPVSNSTA
101: SSSSAAVPQP IPDTLPPPPP PPPLPLQRAA TMPEMNGRSG GGHAGSGLNG IEEDGALDND DDDDDDDDDS EMENRDRLIR KSRSRGGSTR GNRTTIEDHH
201: LQEEKAPPPP PLANSRPIPP PRQHQHQHQQ QQQQPFYDYF FPNVENMPGT TLEDTPPQPQ PQPTRPVPPQ PHSPVVTEDD EDEEEEEEEE EEEEETVIER
301: KPLVEERPKR VEEVTIELEK VTNLRGMKKS KGIGIPGERR GMRMPVTATH LANVFIELDD NFLKASESAH DVSKMLEATR LHYHSNFADN RGHIDHSARV
401: MRVITWNRSF RGIPNADDGK DDVDLEENET HATVLDKLLA WEKKLYDEVK AGELMKIEYQ KKVAHLNRVK KRGGHSDSLE RAKAAVSHLH TRYIVDMQSM
501: DSTVSEINRL RDEQLYLKLV HLVEAMGKMW EMMQIHHQRQ AEISKVLRSL DVSQAVKETN DHHHERTIQL LAVVQEWHTQ FCRMIDHQKE YIKALGGWLK
601: LNLIPIESTL KEKVSSPPRV PNPAIQKLLH AWYDRLDKIP DEMAKSAIIN FAAVVSTIMQ QQEDEISLRN KCEETRKELG RKIRQFEDWY HKYIQKRGPE
701: GMNPDEADND HNDEVAVRQF NVEQIKKRLE EEEEAYHRQS HQVREKSLAS LRTRLPELFQ AMSEVAYSCS DMYRAITYAS KRQSQSERHQ KPSQGQSS

Arabidopsis Description

BZIP protein, putative; 48652-45869 [Source:UniProtKB/TrEMBL;Acc:Q9C824]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.