Factsheet for Bra011166.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68628	Canola	nucleus	94.57	92.75
AT4G30130.3	Thale cress	nucleus	78.58	71.86
Bra038839.1-P	Field mustard	nucleus	67.27	56.74
Bra038563.1-P	Field mustard	nucleus	67.27	54.99
VIT_11s0103g00310.t01	Wine grape	nucleus	58.52	50.59
KRH19063	Soybean	nucleus	56.26	49.8
KRH02818	Soybean	nucleus	55.05	48.99
PGSC0003DMT400015690	Potato	nucleus	55.51	48.17
Solyc07g047830.2.1	Tomato	nucleus	55.35	48.1
KRH37304	Soybean	nucleus	55.2	47.84
KRH12287	Soybean	nucleus	55.35	47.48
GSMUA_Achr7P16020_001	Banana	nucleus	44.04	46.72
GSMUA_Achr3P00490_001	Banana	nucleus	39.97	42.6
GSMUA_Achr7P04930_001	Banana	nucleus	37.56	41.99
Zm00001d046842_P001	Maize	nucleus	25.64	41.87
Zm00001d046839_P001	Maize	nucleus	25.64	41.87
Zm00001d012496_P001	Maize	nucleus	22.93	40.53
Zm00001d013369_P001	Maize	nucleus	32.28	35.26
OQU80872	Sorghum	nucleus	42.08	35.05
Zm00001d049762_P007	Maize	nucleus	41.93	34.88
Zm00001d031530_P006	Maize	nucleus	41.33	34.77
EES06355	Sorghum	cytosol	29.56	31.97
TraesCS7B01G137800.1	Wheat	nucleus	41.03	31.37
HORVU0Hr1G015650.2	Barley	cytosol, nucleus	20.81	31.22
TraesCS6B01G182400.1	Wheat	cytosol	29.26	30.99
Zm00001d053766_P001	Maize	cytosol	28.81	30.56
Os02t0175301-00	Rice	nucleus	17.19	30.4
TraesCS6D01G144300.1	Wheat	cytosol	28.96	30.33
TraesCS7D01G251500.1	Wheat	cytosol	41.33	30.28
TraesCS6A01G154500.2	Wheat	cytosol	28.81	30.27
TraesCS7A01G252800.1	Wheat	nucleus	38.76	30.02
HORVU7Hr1G052210.21	Barley	cytosol	37.1	29.25
Os02t0175200-00	Rice	cytosol, mitochondrion	13.73	28.89
Bra009665.1-P	Field mustard	cytosol	25.49	23.9
Bra011832.1-P	Field mustard	nucleus	24.74	23.87
Bra012035.1-P	Field mustard	nucleus	24.74	22.75
Bra020807.1-P	Field mustard	nucleus	25.79	22.41
Bra036821.1-P	Field mustard	nucleus	20.21	20.94
Bra011597.1-P	Field mustard	nucleus	25.64	20.33
Bra015667.1-P	Field mustard	nucleus	25.34	20.12
Bra017947.1-P	Field mustard	nucleus	26.7	19.3
Bra009853.1-P	Field mustard	nucleus	20.51	18.5
Bra007523.1-P	Field mustard	nucleus	19.61	17.98
Bra002985.1-P	Field mustard	nucleus	19.46	17.82
Bra022983.1-P	Field mustard	cytosol	18.4	17.71
Bra014497.1-P	Field mustard	nucleus	19.76	17.19
Bra000365.1-P	Field mustard	nucleus	20.51	16.96
Bra018963.1-P	Field mustard	nucleus	19.16	16.93
Bra025823.1-P	Field mustard	peroxisome	20.97	12.11

Protein Annotations

EnsemblPlants:Bra011166.1	EnsemblPlants:Bra011166.1-P	EnsemblPlantsGene:Bra011166	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF3	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI0002546F8B
UniProt:M4D3W2	MapMan:35.2	:	:	:	:

Description

AT4G30130 (E=3e-148) | unknown protein

Coordinates

chrA01:-:3561450..3563794

Molecular Weight (calculated)

75138.2 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.610

Length

663 amino acids

Sequence
(BLAST)

001: MGCSNSKLGE DEAVQICRDR KRFIKQAVEL RTSFASAHIA YIHSLRKVSE ALREYIEGDE PHEFVSPVKR MSSGFIELSP SSKAIQNKVE SNLEVSCLMA
101: SGTRPVQVEE KPPRSPETYH VETYGADSFL GMNINNSPNR PPPSPQNSQW DFFWNPFSSL DYYGYGFDNR RGMEDEVRRV REEEGIPDLE EDESSPRWFQ
201: DHHNIMKATE DCNTDQEGNV SEVETQEQEE QGNNVVTRGD AKGEETQGFT VYLTRRPTSM GEVIKDLEDQ FEIICNAANE VSGLLEAGRA QYISSNSDLS
301: AMKMLNPVSL FSSRSSSSSS RFLITSESSS SEFSEESCML SGSHQSTLDR LYAWEKKLYD EVKSGERVRI AYEKKCLALR NHDVKGDNSS AVDKTRATMR
401: DLHTQMNVSI HSIESISERI ETLRDQELLP QLLELLQGLA RMWKVMAECH QIQKRTLDEA KRLLAATNLK KRQQSSLPEI NTQRLARSAL NLVAQLQNWR
501: VCFQAWITSQ RSYVLSLTGW LLRCFRCDPD PEKVRLTTCP HPIYEVCIGW SRLLNGLNEK PVVDKLDFFA CGMGSIFARQ LREEDQSQGG DGSRSMELVE
601: ADKVEEEEER MMNAEKLAEI AVKVLCHGMC VAVSSLAEFA ISSADEHSKL VNHPEEATSE QQH

Best Arabidopsis Sequence Match ( AT4G30130.3 )
(BLAST)

001: MGCSHSKFDD DEAVQICKDR KRFIKQAVEH RTGFASGHIA YIQSLRKVSD ALREYIEGDE PHEFMLDTCV TPVKRMSSSG GFIEISPPSK MVQSEAESKL
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI

Arabidopsis Description

DUF630 family protein (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9SZW6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.