Factsheet for Bra025823.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29526	Canola	peroxisome	99.22	99.13
AT1G20530.1	Thale cress	cytosol	39.81	74.43
KRH60958	Soybean	cytosol	18.12	31.42
KRH51633	Soybean	cytosol	17.86	30.87
VIT_18s0001g00170.t01	Wine grape	cytosol	18.55	28.71
Os02t0669900-01	Rice	cytosol	9.93	26.7
Bra009665.1-P	Field mustard	cytosol	16.29	26.45
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	15.16	26.4
GSMUA_Achr7P04020_001	Banana	cytosol	16.03	26.29
GSMUA_Achr11P...	Banana	mitochondrion	15.33	26.19
GSMUA_Achr1P18120_001	Banana	cytosol	15.42	26.03
HORVU2Hr1G096140.2	Barley	cytosol	8.45	25.94
GSMUA_Achr3P14690_001	Banana	nucleus	15.85	25.85
Bra020807.1-P	Field mustard	nucleus	16.99	25.56
OQU85656	Sorghum	cytosol	15.94	23.89
Zm00001d017553_P001	Maize	cytosol	15.59	23.77
Bra011597.1-P	Field mustard	nucleus	16.99	23.33
Os04t0562800-00	Rice	cytosol, mitochondrion	10.98	22.99
Os08t0551200-00	Rice	cytosol	15.77	22.35
KXG26898	Sorghum	cytosol	15.33	22.19
Zm00001d026130_P001	Maize	nucleus	15.16	22.05
TraesCS6A01G253600.1	Wheat	nucleus	14.63	22.02
TraesCS6D01G235200.1	Wheat	nucleus	14.63	22.02
HORVU6Hr1G064670.13	Barley	nucleus	14.55	21.97
TraesCS6B01G271800.1	Wheat	nucleus	14.46	21.78
TraesCS7B01G171500.1	Wheat	cytosol	15.07	21.68
Zm00001d002669_P002	Maize	cytosol	14.9	21.67
TraesCS2A01G405700.1	Wheat	cytosol	14.29	21.55
TraesCS2B01G423500.1	Wheat	cytosol	14.37	21.54
TraesCS7D01G273600.1	Wheat	cytosol	15.16	21.48
TraesCS2D01G402400.1	Wheat	cytosol	14.2	21.48
EER97130	Sorghum	nucleus	16.99	21.36
Zm00001d006286_P001	Maize	nucleus	16.9	21.23
Bra036821.1-P	Field mustard	nucleus	11.76	21.09
Os09t0547300-01	Rice	nucleus	16.81	21.0
Bra011166.1-P	Field mustard	nucleus	12.11	20.97
HORVU7Hr1G057760.4	Barley	cytosol	11.85	20.76
Zm00001d021452_P001	Maize	nucleus	16.9	20.62
Bra015667.1-P	Field mustard	nucleus	14.81	20.36
HORVU2Hr1G096180.1	Barley	cytosol	10.54	19.77
Bra017947.1-P	Field mustard	nucleus	15.68	19.63
TraesCS5D01G353500.1	Wheat	nucleus	16.46	19.61
TraesCS5A01G347200.1	Wheat	nucleus	16.38	19.6
TraesCS5B01G348100.1	Wheat	nucleus	16.38	19.58
HORVU5Hr1G086500.2	Barley	nucleus	16.29	19.32
Bra011832.1-P	Field mustard	nucleus	11.5	19.21
Bra038839.1-P	Field mustard	nucleus	12.89	18.83
Bra038563.1-P	Field mustard	nucleus	13.07	18.5
TraesCS7A01G273600.1	Wheat	cytosol, mitochondrion, nucleus	15.07	18.44
Bra007523.1-P	Field mustard	nucleus	11.59	18.4
Bra022983.1-P	Field mustard	cytosol	10.89	18.14
Bra012035.1-P	Field mustard	nucleus	11.32	18.03
Bra002985.1-P	Field mustard	nucleus	11.24	17.82
Bra009853.1-P	Field mustard	nucleus	11.32	17.69
Bra000365.1-P	Field mustard	nucleus	11.67	16.71
Bra014497.1-P	Field mustard	nucleus	11.06	16.67
Bra018963.1-P	Field mustard	nucleus	10.1	15.47

Protein Annotations

MapMan:11.7.1.7	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlantsGene:Bra025823	EnsemblPlants:Bra025823.1	EnsemblPlants:Bra025823.1-P	ncoils:Coil	InterPro:DUF630	InterPro:DUF632
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	UniProt:M4EAL4	PFAM:PF00501	PFAM:PF04782	PFAM:PF04783	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR24096	PANTHER:PTHR24096:SF186	SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000253EF64
SEG:seg	:	:	:	:	:

Description

AT1G20530 (E=6e-219) | unknown protein

Coordinates

chrA06:-:8234830..8244701

Molecular Weight (calculated)

129042.0 Da

IEP (calculated)

8.038

GRAVY (calculated)

-0.434

Length

1148 amino acids

Sequence
(BLAST)

0001: MGCSPSKLDG LPAVALCRDR CNSLEETLRR SYALADAHSA YLLSLNTVGP ALHRFFDQAV ESPPDVDSDA NESPDTSSPE SSSPTHSVST SSDSDLPPKF
0101: DSDNEEDGNK GKYCHLFRNH EPFHSRNYES GINTPPPPPP PPSTNAWDFI NFFESYEFPY NTNLKELKDK ETTRCNDEDK PKKKNAPIRK NDEKIRREED
0201: KCVLKILEKK KKLKPEKTRE PKDQKVSSDF SEVTKQWQEM FKEASEAGSE VSKMLDTSRF RYYQKTSVYQ ASSNVLYAKK MTPVEDFGSS FSNLSSTLKK
0301: LFMWEKKLYQ EVKAEEKLRT SHMKRCKELR RLEGKSTTDV NKLESIRSSI QCLSTRITVS IQMIDNICLM INKLRDEELW SQIKKLIHRL SEMWSSMLEC
0401: HSRQSRVIAE AKKLDKMTFK GNLDISQLEL AMELKLELRN WSQSLSNWID AQDQYVKALN SWLMRCLKQE PQEPTPDLSE EPPLFGAVNS WSLSLGRSDG
0501: EKEFTEAVYA LLMQISRQVE KRRMELEEQR TVNGGDKDAE RKLVMLEKEE QKMQRKMKTV PSVELMGSLN LKANMVEIFK CVEKLSTNLK QSYEEVDLTT
0601: PETIFSRFVG VHRETKMANV ERSSLVDSRS GFCKENSTFY SKRNPISLPA SPSLHVTTFI SCQTHSGTTA FIDAATGQRL SFSDLWRAVD RVAECLHRDV
0701: GLRRGDVILI LSPNSFYIPI VCLAVMSLGA VVTTANTLST VGEISKQIAD SNPTLAFTTV QLAHKLPAGI SIVLTEEEHV EPSRVVRVVG GFSGMMKKEP
0801: SGQRVRDRVN QEDTAVMLYS SGTTGASKGV ISSHRNLTSY VAKMVAKESL EDKILICTVP MFHTFGLLMF AMATVALGST VVILRRFELS DMLAAVEKYR
0901: ATALILAPPV LVVMTNEGDI IKAKYDLSSL KKVTCGGAPL SKEAYALTES NGGGAYMDMV DSRRYGTVGT LTPDVEARIV DPNTGRFMGT NQTGELWLKG
1001: PSISKGYFKN QEATSETFNL EGWLKTGDLC YIDDDGFLYV VDRLKELIKY KGYQVAPAEL EALLITHPDI LDAAVIPFPD KEAGQYPMAY VTRTLGSNLS
1101: EKQVIDFISK QVAPYKKIRK VAFINSIPKT ASGKILRKDL IKLPSSKL

Best Arabidopsis Sequence Match ( AT1G20500.1 )
(BLAST)

001: MAYPERSLIV DPRSGFCKSN STFYSKRQPL SLPPNLSRDV TTFISSQPHR GKTAFIDAAT GQCLTFSDLW RAVDRVADCL YHEVGIRRGD VVLILSPNSI
101: FIPVVCLSVM SLGAVFTTAN TLNTSGEISK QIADSNPTLV FTTRQLAPKL PVAISVVLTD DEVYQELTSA IRVVGILSEM VKKEPSGQRV RDRVNQDDTA
201: MMLYSSGTTG PSKGVISSHR NLTAHVARFI SDNLKRDDIF ICTVPMFHTY GLLTFAMGTV ALGSTVVILR RFQLHDMMDA VEKHRATALA LAPPVLVAMI
301: NDADLIKAKY DLSSLKTVRC GGAPLSKEVT EGFLEKYPTV DILQGYALTE SNGGGAFTNS AEESRRYGTA GTLTSDVEAR IVDPNTGRFM GINQTGELWL
401: KGPSISKGYF KNQEATNETI NLEGWLKTGD LCYIDEDGFL FVVDRLKELI KYKGYQVPPA ELEALLITHP DILDAAVIPF PDKEAGQYPM AYVVRKHESN
501: LSEKQVIDFI SKQVAPYKKI RKVSFINSIP KTASGKTLRK DLIKLATSKL

Arabidopsis Description

4CLL44-coumarate--CoA ligase-like 4 [Source:UniProtKB/Swiss-Prot;Acc:P0C5B6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.