Factsheet for TraesCS6D01G235200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G271800.1	Wheat	nucleus	95.54	95.67
TraesCS6A01G253600.1	Wheat	nucleus	95.41	95.41
HORVU6Hr1G064670.13	Barley	nucleus	91.48	91.84
Os02t0669900-01	Rice	cytosol	44.43	79.39
Zm00001d017553_P001	Maize	cytosol	69.46	70.39
OQU85656	Sorghum	cytosol	69.99	69.71
TraesCS2D01G402400.1	Wheat	cytosol	55.57	55.86
GSMUA_Achr11P...	Banana	mitochondrion	37.35	42.41
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, nucleus	34.99	40.52
CDX76322	Canola	cytosol	34.73	37.48
CDY17530	Canola	cytosol	34.21	36.76
Bra009665.1-P	Field mustard	cytosol	33.55	36.21
CDX88008	Canola	nucleus	33.81	36.08
CDY07877	Canola	cytosol	33.81	36.08
AT2G17110.1	Thale cress	nucleus	34.6	36.02
Bra020807.1-P	Field mustard	nucleus	35.65	35.65
CDX75484	Canola	cytosol, plastid	32.5	35.58
KRH14028	Soybean	cytosol	32.63	33.97
CDX69122	Canola	nucleus	33.42	33.95
PGSC0003DMT400043330	Potato	mitochondrion	35.78	33.83
Solyc10g074470.1.1	Tomato	cytosol	35.52	33.75
Bra011597.1-P	Field mustard	nucleus	36.96	33.73
KRH74089	Soybean	cytosol	34.6	33.72
TraesCS7D01G273600.1	Wheat	cytosol	34.99	32.96
AT4G35240.1	Thale cress	nucleus	37.35	32.95
VIT_03s0038g03260.t01	Wine grape	cytosol	34.47	32.39
Solyc01g112050.2.1	Tomato	nucleus	36.44	31.24
TraesCS5D01G353500.1	Wheat	nucleus	39.32	31.12
PGSC0003DMT400048013	Potato	nucleus	37.09	31.0
VIT_18s0001g00170.t01	Wine grape	cytosol	29.49	30.32
KRH60958	Soybean	cytosol	25.69	29.61
KRH51633	Soybean	cytosol	25.29	29.07
CDY31475	Canola	nucleus	21.23	26.91
AT1G20530.1	Thale cress	cytosol	21.23	26.38
TraesCS1D01G265000.1	Wheat	nucleus	28.05	23.83
TraesCS5D01G340500.1	Wheat	plastid	21.23	21.92
TraesCS3D01G509700.1	Wheat	plastid	25.56	21.2
TraesCS6D01G144300.1	Wheat	cytosol	17.04	20.54
TraesCS5D01G336000.1	Wheat	nucleus	17.69	20.3
TraesCS7D01G074000.2	Wheat	nucleus	18.74	19.46
TraesCS6D01G225400.1	Wheat	cytosol, mitochondrion	14.15	19.22
TraesCS3D01G213000.1	Wheat	nucleus	16.91	18.45
TraesCS1D01G219800.1	Wheat	nucleus	18.09	17.9
TraesCS2D01G161700.1	Wheat	nucleus	16.12	16.92
TraesCS5D01G201000.1	Wheat	nucleus	15.6	16.74
TraesCS7D01G251500.1	Wheat	cytosol	19.66	16.57
TraesCS4D01G178500.1	Wheat	cytosol	17.17	16.11
TraesCS1D01G246700.1	Wheat	nucleus	14.29	16.1
Bra025823.1-P	Field mustard	peroxisome	22.02	14.63
TraesCS3D01G202100.2	Wheat	nucleus	15.47	14.57
CDY29526	Canola	peroxisome	21.89	14.53

Protein Annotations

EnsemblPlants:TraesCS6D01G235200.1	EnsemblPlantsGene:TraesCS6D01G235200	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF16	PFAM:PF04782	PFAM:PF04783	SEG:seg	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:+:330107697..330111371

Molecular Weight (calculated)

83424.2 Da

IEP (calculated)

7.467

GRAVY (calculated)

-0.422

Length

763 amino acids

Sequence
(BLAST)

001: MGCKGSKLDE QEAVALCRGR ADLLAVAVRH RDALGAAHAA LAGSLLSVSS SLHLLLVSAS ARQRPGIALP AAANAKAVDS PPAAPQPSSP PHSSSHIDFA
101: PSSGSDSGSV ASSSPRRVDD QLHHPHPHPH ALQFPHYGYG YGYGYEPEPP FGYPPGSLQL YYARSRPPPA SVAVEQRPPA SERVYFGSSE PAGGNARYYS
201: YGGVATPAGR AAAPPPLPPR ASSWDFFNVF DDYQVHDNYC YDAAGAGTMA TTPYTPSRCS RDVREEEGIP ELEEDDAVVK EVSSEHYMPG SGGARSRRSS
301: VGGMSSSEED NCVVDKGVLS GGGVARQQAP AQPNVAASVR THRKSSESAD FAGEIKAQFV RAADAVWEVA PILEVDRRSY QYHPRSSVYH VSSRMVSTGA
401: LPNSGHGGEE LDVGGWKKVA EGERSLSVTL QKLYIWEKKL YNEVKSEEKM RLLLAKNSKR LKFLDQKGAE AQKIDATQNL VRKLAAKIRM AVRVIAKVSK
501: KINKVRDEEL WPQIMALIQG FVKMWQEKLD CYQTQCEAIS EAKNLDSAIS GGISRDLAME LEVDLVKWIV NFCSWVNAQR SFVKALNGWL ALCLNYQQEE
601: TPDGAPPYSP GRVGAPLVFV ICNTWSQAMD RISEKEVVTA MQALVSSVRN QCEHRAAVEP SELIFVTRER EKWNRILERK SVEINREADT LNRKLALVPG
701: RQSLLPTAQT YQAHFLEADS LHVSLSRVLQ SLESFASSSL QAFRETLRHA EEETLSRESA KAS

Best Arabidopsis Sequence Match ( AT2G17110.1 )
(BLAST)

001: MGCSTSKLDD LPAVALCRDR CSFLEAAIHQ RYALSEAHVS YTQSLKAISH SLHQFINHHH RYNDSDSPKK AKPKMDSGSG HLDFDSDSDS DDDDDIDSLH
101: SSPLHHHLED DDSNPKSYLH MNYMKNSYMP PSLVYEQRPS SPQRVHFGES SSSSTSEYNP YLNSNYGSKL PPPPPSPPRE KVWDFLDPFD TYYTPYTPSR
201: DTRELRDELG VPDLEEDDVV VKEVHGKQKF VAAVSVEEPL GNSGASTSGG GGGGGKASLY QTRPSVSVEK EEMEHEVHIV EKKIVEDSGG DEVRKSKAAV
301: ARGGGGVRRG VPEVAKEIEA QFLRAAESGN EIAVMLEVGK HPYGRKNVSS KKLYEGTPSP SVVSSAQSST SKKAKAEASS SVTAPTYADI EAELALKSRN
401: LSSTLHKLHL WEKKLYDEVK AEEKMRVNHE KKLRKLKRMD ERGAENQKVD STRKLVRSLS TKIRIAIQVV DKISVTINKI RDEELWLQLN ELIQGLSKMW
501: KSMLECHKSQ CEAIKEARGL GPIRASKNFG GEHLEVTRTL GYELINWIVG FSSWVSAQKG FVRELNSWLM KCLFYEPEET PDGIVPFSPG RIGAPMIFVI
601: CNQWEQALDR ISEKEVIEAI RRFTTSVLHL WEQDRLATRE RIIGHGDPRN MDREEQRIQK EIQELEMKMV LVGPGEDNIV YQSDTSNESL QGSLQRIFEA
701: MERFTEESLK AYVDLLHRAE EEECDSRETD EED

Arabidopsis Description

Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G17110]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.