Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G20530.1 | Thale cress | cytosol | 75.08 | 73.62 |
| CDY29526 | Canola | peroxisome | 93.52 | 49.0 |
| KRH60958 | Soybean | cytosol | 33.55 | 30.51 |
| KRH51633 | Soybean | cytosol | 33.39 | 30.27 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 34.88 | 28.3 |
| Os02t0669900-01 | Rice | cytosol | 18.77 | 26.46 |
| CDX76322 | Canola | cytosol | 31.06 | 26.45 |
| CDY17530 | Canola | cytosol | 30.9 | 26.2 |
| GSMUA_Achr11P... | Banana | mitochondrion | 29.24 | 26.19 |
| CDX88008 | Canola | nucleus | 30.9 | 26.01 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 28.24 | 25.8 |
| HORVU2Hr1G096140.2 | Barley | cytosol | 15.95 | 25.67 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 29.73 | 25.57 |
| CDY07877 | Canola | cytosol | 30.23 | 25.45 |
| CDX69122 | Canola | nucleus | 31.4 | 25.17 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 29.4 | 25.14 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 28.24 | 25.0 |
| CDX75484 | Canola | cytosol, plastid | 27.74 | 23.96 |
| OQU85656 | Sorghum | cytosol | 29.73 | 23.37 |
| Zm00001d017553_P001 | Maize | cytosol | 28.74 | 22.97 |
| Os04t0562800-00 | Rice | cytosol, mitochondrion | 20.76 | 22.81 |
| CDY28162 | Canola | cytosol | 15.28 | 22.77 |
| CDY66508 | Canola | cytosol, nucleus | 15.78 | 22.46 |
| KXG26898 | Sorghum | cytosol | 29.57 | 22.45 |
| Zm00001d026130_P001 | Maize | nucleus | 29.07 | 22.18 |
| Zm00001d002669_P002 | Maize | cytosol | 28.57 | 21.8 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 27.24 | 21.49 |
| CDY28161 | Canola | nucleus | 7.31 | 21.46 |
| HORVU6Hr1G064670.13 | Barley | nucleus | 27.08 | 21.45 |
| Os08t0551200-00 | Rice | cytosol | 28.74 | 21.36 |
| TraesCS7B01G171500.1 | Wheat | cytosol | 28.24 | 21.3 |
| TraesCS6B01G271800.1 | Wheat | nucleus | 26.91 | 21.26 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 28.57 | 21.23 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 26.91 | 21.23 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 26.74 | 21.16 |
| TraesCS2B01G423500.1 | Wheat | cytosol | 26.91 | 21.15 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 26.58 | 21.08 |
| CDX77992 | Canola | nucleus | 21.93 | 20.99 |
| CDX87081 | Canola | nucleus | 18.44 | 20.79 |
| CDX73734 | Canola | nucleus | 21.93 | 20.62 |
| CDX88372 | Canola | nucleus | 28.24 | 20.58 |
| EER97130 | Sorghum | nucleus | 30.9 | 20.37 |
| Os09t0547300-01 | Rice | nucleus | 31.06 | 20.35 |
| Zm00001d006286_P001 | Maize | nucleus | 30.73 | 20.24 |
| CDY41788 | Canola | nucleus | 28.57 | 20.19 |
| HORVU7Hr1G057760.4 | Barley | cytosol | 21.93 | 20.15 |
| CDX68628 | Canola | nucleus | 22.43 | 19.97 |
| CDY42005 | Canola | nucleus | 20.27 | 19.93 |
| CDX69386 | Canola | nucleus | 19.93 | 19.87 |
| CDY04672 | Canola | nucleus | 28.57 | 19.72 |
| Zm00001d021452_P001 | Maize | nucleus | 30.73 | 19.66 |
| HORVU2Hr1G096180.1 | Barley | cytosol | 19.77 | 19.44 |
| CDY08177 | Canola | nucleus | 28.57 | 19.3 |
| CDY39136 | Canola | nucleus | 23.92 | 19.12 |
| CDX82615 | Canola | nucleus | 23.92 | 19.1 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 30.4 | 19.08 |
| TraesCS5B01G348100.1 | Wheat | nucleus | 30.4 | 19.06 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 30.4 | 18.98 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 30.4 | 18.91 |
| CDX83412 | Canola | nucleus | 21.1 | 18.87 |
| CDX71474 | Canola | nucleus | 22.26 | 18.64 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 28.41 | 18.23 |
| CDY42454 | Canola | cytosol | 21.1 | 18.12 |
| CDY04477 | Canola | nucleus | 21.59 | 18.08 |
| CDY18335 | Canola | cytosol | 20.93 | 17.82 |
| CDX71821 | Canola | nucleus | 20.93 | 17.75 |
| CDX95620 | Canola | nucleus | 20.43 | 17.7 |
| CDX84637 | Canola | cytosol | 19.6 | 17.59 |
| CDY42691 | Canola | nucleus | 20.6 | 17.15 |
| CDX79570 | Canola | cytosol | 19.44 | 16.98 |
| CDY41178 | Canola | nucleus | 20.27 | 16.92 |
| CDX80528 | Canola | nucleus | 20.6 | 16.92 |
| CDX88193 | Canola | nucleus | 20.43 | 16.69 |
| CDY56992 | Canola | nucleus | 19.93 | 16.51 |
| CDX87516 | Canola | nucleus | 12.13 | 16.22 |
| CDY61085 | Canola | nucleus | 18.44 | 14.88 |
| CDY52975 | Canola | nucleus | 18.27 | 14.73 |
Protein Annotations
| EnsemblPlants:CDY31475 | EnsemblPlantsGene:GSBRNA2T00047749001 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF19 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:CDY31475 | ProteinID:CDY31475.1 | SEG:seg |
| UniParc:UPI0004EE9E9A | UniProt:A0A078GYA7 | MapMan:35.1 | : | : | : |
Description
BnaC05g15840DBnaC05g15840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYA7]
Coordinates
chrLK032273:-:127954..130043
Molecular Weight (calculated)
69379.4 Da
IEP (calculated)
7.365
GRAVY (calculated)
-0.796
Length
602 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSPSKLDG LPAVALCRDR CNSLEETLRR SYALADAHSA YLLSLNTVGP ALHRFFDQAV ESPPEADSEA NESRDTSSPE SSSPTHSVVS TSSDSDLPPK
101: FDSDCEEDGN KGTDCHLFRC HTNHEPFHSR NYESGINTPP PPPPSTNAWD FINFFESYEF PYNTNLKELK DKETTRCNDE DKPKKKNAPI RKNDDKIRRE
201: EEKCVLKILE KKKKLKPEKT REPKDQKVSS DFSEVTKQWQ EMFKKASEAG SEVSKMLDTS RFRYYQKTSV YQASSNVLYA KKMAPVEDFV SSFSNLSSTL
301: TKLFMWEKKL YQEVKAEEKL RTSHIKRCKK LRRLEGKSTD PSKIEAIRSS IQCLSTRITV SIQMIDNICL MINKLRDEEL WSQIKELIRR LSEMWSSMLE
401: CHSRQSRVIA EAKKFDKMTF KGNLDISQLE LAMELKLELR NWKQSLSNWI DAQDQYVKAL NSWLMRCLKQ EPQEPTPDLS EEPPLFGAVN SWSQSLGRSD
501: GEKEFTEAVY ALLMQISRLV EKRRMELEEQ RKVNGGDKDV ERKLVTLEKE EQTMQRKMKT VPSVELMGSL NPKANMEEIF KCMEKLSTNL KQSYEEVALI
601: CA
101: FDSDCEEDGN KGTDCHLFRC HTNHEPFHSR NYESGINTPP PPPPSTNAWD FINFFESYEF PYNTNLKELK DKETTRCNDE DKPKKKNAPI RKNDDKIRRE
201: EEKCVLKILE KKKKLKPEKT REPKDQKVSS DFSEVTKQWQ EMFKKASEAG SEVSKMLDTS RFRYYQKTSV YQASSNVLYA KKMAPVEDFV SSFSNLSSTL
301: TKLFMWEKKL YQEVKAEEKL RTSHIKRCKK LRRLEGKSTD PSKIEAIRSS IQCLSTRITV SIQMIDNICL MINKLRDEEL WSQIKELIRR LSEMWSSMLE
401: CHSRQSRVIA EAKKFDKMTF KGNLDISQLE LAMELKLELR NWKQSLSNWI DAQDQYVKAL NSWLMRCLKQ EPQEPTPDLS EEPPLFGAVN SWSQSLGRSD
501: GEKEFTEAVY ALLMQISRLV EKRRMELEEQ RKVNGGDKDV ERKLVTLEKE EQTMQRKMKT VPSVELMGSL NPKANMEEIF KCMEKLSTNL KQSYEEVALI
601: CA
001: MGCSPSKLDG LPAVSLCRDR CSSLEDTLRR SYALADAHSA YLLSLNTVGP ALHRFFQHAV ESPPDVESEA DESPETYSPE SCSSAHSVTS SDSDLPPKFD
101: SDCEEGEGTN CDLLSGSKPE SLNLNHDSFY SRRYESGTIT PPPPPPAPSN YAWDFINFFE SYELPYTTDV NDLKDRETTP SHEEDKLKKK KITVSQNDEK
201: IKVEEEKKTL RISEKNRKRA PKESKDQKVS SDLSEVTKQL QEMFKKASES GNDVSKMFDT SRFRYYQKSS VYQCNVRILL PSSNILYTKK VMTPFDPKPV
301: EESNFNNLSS TLKKLFMWEK KLYQEVKAEE KLRTSHMKNY KLLRRLEAKS ADLSKIEAIR SSIQCLSTRM RVSIHKINNI CLTINKLRDE ELWFQMKELI
401: HRLSEMWNSM LECHSRQSKV IAEAKKLDKM TIKENLDLSQ LELAMELKLE LRNWSLSMSN WIDAQAQYVK ALNNWLMRCL KQEPQEPTPD LSEEPPLFGA
501: INTWSQNLEI SHGEKEFTEA VYTILMHVNH QVEKQRMELE EQRNVNGSVK DIERKLMMLE KEEQKMQRKM KTVPSVALMG SLNLKSNMEQ IFKSMEKLAT
601: NSKQTYEELD LMCT
101: SDCEEGEGTN CDLLSGSKPE SLNLNHDSFY SRRYESGTIT PPPPPPAPSN YAWDFINFFE SYELPYTTDV NDLKDRETTP SHEEDKLKKK KITVSQNDEK
201: IKVEEEKKTL RISEKNRKRA PKESKDQKVS SDLSEVTKQL QEMFKKASES GNDVSKMFDT SRFRYYQKSS VYQCNVRILL PSSNILYTKK VMTPFDPKPV
301: EESNFNNLSS TLKKLFMWEK KLYQEVKAEE KLRTSHMKNY KLLRRLEAKS ADLSKIEAIR SSIQCLSTRM RVSIHKINNI CLTINKLRDE ELWFQMKELI
401: HRLSEMWNSM LECHSRQSKV IAEAKKLDKM TIKENLDLSQ LELAMELKLE LRNWSLSMSN WIDAQAQYVK ALNNWLMRCL KQEPQEPTPD LSEEPPLFGA
501: INTWSQNLEI SHGEKEFTEA VYTILMHVNH QVEKQRMELE EQRNVNGSVK DIERKLMMLE KEEQKMQRKM KTVPSVALMG SLNLKSNMEQ IFKSMEKLAT
601: NSKQTYEELD LMCT
Arabidopsis Description
F5M15.15 [Source:UniProtKB/TrEMBL;Acc:Q9LMW0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.