Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G348100.1 | Wheat | nucleus | 97.41 | 97.81 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 96.58 | 97.08 |
| HORVU5Hr1G086500.2 | Barley | nucleus | 94.19 | 93.8 |
| Os09t0547300-01 | Rice | nucleus | 72.72 | 76.28 |
| EER97130 | Sorghum | nucleus | 72.1 | 76.12 |
| Zm00001d006286_P001 | Maize | nucleus | 71.78 | 75.71 |
| Zm00001d021452_P001 | Maize | nucleus | 71.47 | 73.22 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 48.65 | 57.9 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 39.52 | 54.12 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 37.86 | 53.68 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 35.68 | 49.14 |
| PGSC0003DMT400043330 | Potato | mitochondrion | 35.06 | 41.88 |
| Solyc10g074470.1.1 | Tomato | cytosol | 34.65 | 41.59 |
| CDY17530 | Canola | cytosol | 30.6 | 41.55 |
| CDX76322 | Canola | cytosol | 30.39 | 41.44 |
| Bra009665.1-P | Field mustard | cytosol | 30.19 | 41.16 |
| VIT_03s0038g03260.t01 | Wine grape | cytosol | 34.34 | 40.76 |
| CDX88008 | Canola | nucleus | 30.19 | 40.7 |
| Bra020807.1-P | Field mustard | nucleus | 31.95 | 40.37 |
| Solyc01g112050.2.1 | Tomato | nucleus | 37.03 | 40.11 |
| PGSC0003DMT400048013 | Potato | nucleus | 37.66 | 39.76 |
| CDX69122 | Canola | nucleus | 30.91 | 39.68 |
| CDX75484 | Canola | cytosol, plastid | 28.63 | 39.6 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 31.12 | 39.32 |
| AT2G17110.1 | Thale cress | nucleus | 29.77 | 39.15 |
| CDY07877 | Canola | cytosol | 28.94 | 39.02 |
| KRH14028 | Soybean | cytosol | 29.67 | 39.02 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 30.39 | 38.6 |
| KRH74089 | Soybean | cytosol | 31.22 | 38.44 |
| Bra011597.1-P | Field mustard | nucleus | 32.78 | 37.8 |
| AT4G35240.1 | Thale cress | nucleus | 33.82 | 37.69 |
| KRH60958 | Soybean | cytosol | 23.55 | 34.29 |
| VIT_18s0001g00170.t01 | Wine grape | cytosol | 26.14 | 33.96 |
| KRH51633 | Soybean | cytosol | 23.13 | 33.58 |
| CDY31475 | Canola | nucleus | 18.98 | 30.4 |
| AT1G20530.1 | Thale cress | cytosol | 19.29 | 30.29 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 25.0 | 26.84 |
| TraesCS5D01G340500.1 | Wheat | plastid | 19.5 | 25.44 |
| TraesCS3D01G509700.1 | Wheat | plastid | 22.41 | 23.48 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 17.01 | 22.31 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 14.42 | 21.96 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 15.66 | 21.6 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 14.11 | 20.45 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 15.04 | 20.39 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 14.21 | 20.24 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 11.62 | 19.93 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 18.26 | 19.45 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 16.39 | 19.43 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 14.52 | 19.26 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 14.42 | 17.16 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 13.49 | 16.86 |
| Bra025823.1-P | Field mustard | peroxisome | 19.61 | 16.46 |
| CDY29526 | Canola | peroxisome | 19.61 | 16.45 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G353500.1 | EnsemblPlantsGene:TraesCS5D01G353500 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF2 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5D:+:435776363..435780406
Molecular Weight (calculated)
104929.0 Da
IEP (calculated)
5.245
GRAVY (calculated)
-0.717
Length
964 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCGQSKLEE EKAVKHCRER SELLALAIRH RYTLADAHRA YADSLGRVGV ALHDFVRGVQ TLPPPPPEPT LHLPPGNRKG DGLPAASPAN NPAIASSSNG
101: QAPPPAAKQV RINPDDQHIH FHSDGDSDSE DGHIKFHSDD EADPGQRRPE IVRSAGDPGQ RPPPQQMGPP PYGSSAYGPP PSYGAPPGYG YGGYPPPPDY
201: GGMGGPGGYD PGYGGMGGAG GNGPGYSSMG PPPPSSVGYD PPGYGGIGGY GQSFFNMNYA RSQPPPPSVS HQHRPEATDA TVQTFFNISY ARGQPPPPSV
301: SFEQRPEASD ATVQTVFNTS YARGQPPPPS GAYEQRPQAS DARVHYYGDG GAQPPPRGYN GYASPPQSSY NQYAYGGYYG GAAAPPPADM PSSSREEVVP
401: PPPPSPPSVS TWDFLNPFET YGSYYDQPTA APAPYTPSRS SKDVREEEGI PDLEDEDMEV VKEAYGEDKH LLNGHTGKGK AAKEEGRSST GDELPRDSKS
501: SLPSSSGSSL DHDVHVVEKS VVGEQVRNEA RQHVAGLPGT GSEKTYVDDN EVVLEIKAQF ERASSSAGEV SKMLEVGKMP YYQKGSGFKV SAMMICGIPT
601: MEEEFLRFEE DKAMGCGNLS STLQKLYMWE RKLLQEVKAE EEERLKYDRK RQDLQILDEK GAETEKIVAA EKEIRKLSTR ISIAIQVVNT ISGKISKLRD
701: DELWPQTCEL IQGLMRMWDV MLECHQIQLH AISQAKNIDS MIDAARFGDD HMDLIKHLEL QLLDWTTCFA GWVTAQKNYV STLNDWLRKG VEYVPEETDD
801: GVPPFSPGRL GAPPIFVICN NWAAGVARIS EKEVVKAMQA FASNVLHLWE KHRSQQRQGM MANKGMDRDL RVMEKDEQKM RKALEAKNKK LVLVSDQTGV
901: SLSAQVLHGA GPQAENSSLQ SSLRNIFEAM ETFTAASANT YKDLNLRAEE EKARVAEESG SSVP
101: QAPPPAAKQV RINPDDQHIH FHSDGDSDSE DGHIKFHSDD EADPGQRRPE IVRSAGDPGQ RPPPQQMGPP PYGSSAYGPP PSYGAPPGYG YGGYPPPPDY
201: GGMGGPGGYD PGYGGMGGAG GNGPGYSSMG PPPPSSVGYD PPGYGGIGGY GQSFFNMNYA RSQPPPPSVS HQHRPEATDA TVQTFFNISY ARGQPPPPSV
301: SFEQRPEASD ATVQTVFNTS YARGQPPPPS GAYEQRPQAS DARVHYYGDG GAQPPPRGYN GYASPPQSSY NQYAYGGYYG GAAAPPPADM PSSSREEVVP
401: PPPPSPPSVS TWDFLNPFET YGSYYDQPTA APAPYTPSRS SKDVREEEGI PDLEDEDMEV VKEAYGEDKH LLNGHTGKGK AAKEEGRSST GDELPRDSKS
501: SLPSSSGSSL DHDVHVVEKS VVGEQVRNEA RQHVAGLPGT GSEKTYVDDN EVVLEIKAQF ERASSSAGEV SKMLEVGKMP YYQKGSGFKV SAMMICGIPT
601: MEEEFLRFEE DKAMGCGNLS STLQKLYMWE RKLLQEVKAE EEERLKYDRK RQDLQILDEK GAETEKIVAA EKEIRKLSTR ISIAIQVVNT ISGKISKLRD
701: DELWPQTCEL IQGLMRMWDV MLECHQIQLH AISQAKNIDS MIDAARFGDD HMDLIKHLEL QLLDWTTCFA GWVTAQKNYV STLNDWLRKG VEYVPEETDD
801: GVPPFSPGRL GAPPIFVICN NWAAGVARIS EKEVVKAMQA FASNVLHLWE KHRSQQRQGM MANKGMDRDL RVMEKDEQKM RKALEAKNKK LVLVSDQTGV
901: SLSAQVLHGA GPQAENSSLQ SSLRNIFEAM ETFTAASANT YKDLNLRAEE EKARVAEESG SSVP
001: MGCTSSKLDD LPAVALCRER CAFLEAAIHQ RYALAESHVA YTHSLREIGH SLHLFINHHH RFVASGGANV GDSPRLNLPP QRKGDLDDEA TNSPKKQKLA
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
101: SSHHNHNHAH SGSGSDSGHL EFDSDSDEDE EDDDDLDLDS LHHHSPPHHH LGNFPIPESA PMGGYMEQQP GYINPYPNPD MMGHPYSGGG SYMHMNYMKN
201: KSMPPSVVYE QRPTSPQRVY IGESSSSYPY PPQNSYFGYS NPVPGPGPGY YGSSSASTTA AATKPPPPPP SPPRSNGWDF LNPFDTYYPP YTPSRDSREL
301: REEEGIPDLE DDDSHYEVVK EVYGKPKFAA GGGHQPNPAA VHMMREESPS PPLDKSGAST SGGGDVGDAS AYQSRPSVSV EKEGMEYEVH VVEKKVVEDE
401: ERRSNATATR GGGGGGGPRA VPEVAKEIEN QFVKAAESGS EIAKLLEVGK HPYGRKHAAS KMLHGVTPSL PSTSGGTSSS AAAAVVPPTY ADIEEELASR
501: SRNLSSTLHK LHLWEKKLYH EVKAEEKLRL AHEKKLRKLK RLDQRGAEAI KVDKTRKLVR DMSTKIRIAI QVVDKISVTI NKIRDEDLWP QLNALIQGLT
601: RMWKTMLECH QSQCQAIREA QGLGPIRASK KLGDEHLEAT SLLGHELINW ILGFSSWVSA QKGYVKELNK WLMKCLLYEP EETPDGIVPF SPGRIGAPPI
701: FVICNQWSQA LDRISEKEVI EAMRSFTTSV LQLWEQDRLD TMMTGHGDSE KKVRNMDREE QRIQREIQAL EKKMILVAPG DGNSLSISGN VVYQSDTSSD
801: SLQGSLQRIF EAMERFTAES MRAYEDLLER TNEETAPREL EEEEEE
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT4G35240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.