Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G137800.1 | Wheat | nucleus | 91.93 | 95.96 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 80.0 | 84.58 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 76.91 | 82.76 |
| Zm00001d046842_P001 | Maize | nucleus | 34.59 | 77.09 |
| Zm00001d046839_P001 | Maize | nucleus | 34.48 | 76.85 |
| OQU80872 | Sorghum | nucleus | 67.18 | 76.38 |
| Zm00001d012496_P001 | Maize | nucleus | 31.6 | 76.27 |
| Zm00001d031530_P006 | Maize | nucleus | 66.3 | 76.14 |
| Zm00001d049762_P007 | Maize | nucleus | 66.96 | 76.04 |
| Zm00001d013369_P001 | Maize | nucleus | 50.5 | 75.29 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 31.27 | 45.5 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 28.95 | 44.18 |
| CDY28161 | Canola | nucleus | 9.94 | 43.9 |
| KRH19063 | Soybean | nucleus | 35.69 | 43.12 |
| PGSC0003DMT400015690 | Potato | nucleus | 36.24 | 42.93 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 36.13 | 42.63 |
| Solyc07g047830.2.1 | Tomato | nucleus | 35.8 | 42.46 |
| KRH02818 | Soybean | nucleus | 34.92 | 42.42 |
| CDY28162 | Canola | cytosol | 18.67 | 41.83 |
| CDY66508 | Canola | cytosol, nucleus | 19.45 | 41.61 |
| Bra011166.1-P | Field mustard | nucleus | 30.28 | 41.33 |
| CDX68628 | Canola | nucleus | 30.61 | 40.98 |
| KRH12287 | Soybean | nucleus | 34.7 | 40.62 |
| KRH37304 | Soybean | nucleus | 33.59 | 39.74 |
| AT4G30130.3 | Thale cress | nucleus | 31.49 | 39.31 |
| CDY39136 | Canola | nucleus | 31.6 | 37.98 |
| CDX82615 | Canola | nucleus | 31.38 | 37.67 |
| Bra038839.1-P | Field mustard | nucleus | 32.38 | 37.28 |
| Bra038563.1-P | Field mustard | nucleus | 33.37 | 37.24 |
| AT2G19090.1 | Thale cress | nucleus | 33.15 | 36.85 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 24.2 | 34.6 |
| TraesCS5D01G340500.1 | Wheat | plastid | 20.33 | 24.9 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 17.13 | 21.09 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 15.36 | 20.9 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 17.35 | 20.69 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 12.6 | 20.28 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 15.8 | 20.11 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 17.68 | 19.68 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 16.57 | 19.66 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 19.01 | 19.15 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 14.59 | 18.88 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 16.69 | 18.64 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 15.58 | 18.29 |
| TraesCS3D01G509700.1 | Wheat | plastid | 18.56 | 18.26 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 19.45 | 18.26 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 13.48 | 18.02 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 14.36 | 16.05 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 12.71 | 15.82 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G251500.1 | EnsemblPlantsGene:TraesCS7D01G251500 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7D:-:224455460..224460404
Molecular Weight (calculated)
100983.0 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.722
Length
905 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIHWLQLQC TGCQQLTTVQ YQTPKFWPGH DIFLTTQGSG DMGCAASRLE DEEAVKMCRD RRDFIKQALD QHNRFASSHI AYIESMKCVS MALQRFVAGD
101: DRHELIFDPF ISPVKQQKPE MLGLPYGSYE KRTVHVAKYL MSGPNPSVSV EEAPRPVETI RVESHYPVDG YAGTDRFFPA NSSPMRPSSH YTPYDRPSYV
201: APSPQEPVRN AYYMPPYDRP SYVAPSPQEP VRNAHYMPPY DRPNYVPSSP QDPVKNSSYY MPPYAPSPQE PVRNSYYMPP YERPNYVPPS PQEPVRNSSY
301: YTPPYDRQSY PPAPPQDPRR TSYYASHDRP NYPPSSPQEP ESSPWDSFWN PFSSLDSYPY PRPRSSYDNV VTDDELARLQ RVREEEGIPE LEEEDDECQK
401: HEQMHNKEGE GEGEDDDDEE ESDEDDDEEE ESDECEHSDD QRCMASNEAR PGKSEVNVKQ EQKGHQSKGV QCAGSSEPRN AVDHEIKAHK KELMRNKVAN
501: AEETPGFTVY LNRKPTSLVE AMKDIDSQFL GICSAAQEVS RMLEASRAQY STSNDLSVKM LNPVALLRSA SIRSSSSRFL LASSGSIDDL FDNDTSSCYS
601: EESCSTMSGS HHSTLDRLYT WEKKLYKEVK VGERLRLEYE KRMAHLRSQD VKGEEPSSVD KTRSALRSLQ TRMKVSIQTV QSISRRIEVL RDEELHPQLM
701: ELIQGLSRMW RAMAERHEAQ KRTIDDAKLL FLQHRASAAT TVALGPPEAT TPPPAAVALE CEVRAWRGAL DAWLSAQRAY ARALAAWARR CLGIGAGAAA
801: PRTVPPAFLV CMEWGLVVEA ASEARVMDGL DFFVAGVGSV CSGAAAGMEG MAGRVLCAGL GAVTGAMAEF AAASADGYDA AVSAALAARA PEGGEEENAG
901: GPPQQ
101: DRHELIFDPF ISPVKQQKPE MLGLPYGSYE KRTVHVAKYL MSGPNPSVSV EEAPRPVETI RVESHYPVDG YAGTDRFFPA NSSPMRPSSH YTPYDRPSYV
201: APSPQEPVRN AYYMPPYDRP SYVAPSPQEP VRNAHYMPPY DRPNYVPSSP QDPVKNSSYY MPPYAPSPQE PVRNSYYMPP YERPNYVPPS PQEPVRNSSY
301: YTPPYDRQSY PPAPPQDPRR TSYYASHDRP NYPPSSPQEP ESSPWDSFWN PFSSLDSYPY PRPRSSYDNV VTDDELARLQ RVREEEGIPE LEEEDDECQK
401: HEQMHNKEGE GEGEDDDDEE ESDEDDDEEE ESDECEHSDD QRCMASNEAR PGKSEVNVKQ EQKGHQSKGV QCAGSSEPRN AVDHEIKAHK KELMRNKVAN
501: AEETPGFTVY LNRKPTSLVE AMKDIDSQFL GICSAAQEVS RMLEASRAQY STSNDLSVKM LNPVALLRSA SIRSSSSRFL LASSGSIDDL FDNDTSSCYS
601: EESCSTMSGS HHSTLDRLYT WEKKLYKEVK VGERLRLEYE KRMAHLRSQD VKGEEPSSVD KTRSALRSLQ TRMKVSIQTV QSISRRIEVL RDEELHPQLM
701: ELIQGLSRMW RAMAERHEAQ KRTIDDAKLL FLQHRASAAT TVALGPPEAT TPPPAAVALE CEVRAWRGAL DAWLSAQRAY ARALAAWARR CLGIGAGAAA
801: PRTVPPAFLV CMEWGLVVEA ASEARVMDGL DFFVAGVGSV CSGAAAGMEG MAGRVLCAGL GAVTGAMAEF AAASADGYDA AVSAALAARA PEGGEEENAG
901: GPPQQ
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.