Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P00490_001 | Banana | nucleus | 63.24 | 60.29 |
| GSMUA_Achr7P16020_001 | Banana | nucleus | 46.71 | 44.32 |
| CDY28162 | Canola | cytosol | 28.33 | 41.58 |
| CDY66508 | Canola | cytosol, nucleus | 27.99 | 39.24 |
| Zm00001d012496_P001 | Maize | nucleus | 24.62 | 38.93 |
| Zm00001d046842_P001 | Maize | nucleus | 26.64 | 38.92 |
| Zm00001d046839_P001 | Maize | nucleus | 26.48 | 38.67 |
| KRH19063 | Soybean | nucleus | 48.06 | 38.05 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 48.74 | 37.68 |
| Bra011166.1-P | Field mustard | nucleus | 41.99 | 37.56 |
| KRH02818 | Soybean | nucleus | 46.88 | 37.32 |
| Solyc07g047830.2.1 | Tomato | nucleus | 47.22 | 36.7 |
| CDX68628 | Canola | nucleus | 41.65 | 36.54 |
| PGSC0003DMT400015690 | Potato | nucleus | 47.05 | 36.52 |
| KRH37304 | Soybean | nucleus | 46.04 | 35.69 |
| KRH12287 | Soybean | nucleus | 46.04 | 35.32 |
| AT4G30130.3 | Thale cress | nucleus | 42.66 | 34.9 |
| CDX82615 | Canola | nucleus | 43.0 | 33.82 |
| CDY39136 | Canola | nucleus | 42.83 | 33.73 |
| Zm00001d031530_P006 | Maize | nucleus | 44.69 | 33.63 |
| CDY28161 | Canola | nucleus | 11.47 | 33.17 |
| Zm00001d049762_P007 | Maize | nucleus | 44.52 | 33.12 |
| OQU80872 | Sorghum | nucleus | 44.35 | 33.04 |
| Bra038839.1-P | Field mustard | nucleus | 43.34 | 32.7 |
| AT2G19090.1 | Thale cress | nucleus | 43.17 | 31.45 |
| Bra038563.1-P | Field mustard | nucleus | 43.0 | 31.44 |
| Zm00001d013369_P001 | Maize | nucleus | 32.04 | 31.3 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 44.18 | 30.22 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 44.18 | 28.95 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 40.47 | 28.04 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 37.27 | 26.28 |
| GSMUA_Achr1P07380_001 | Banana | cytosol, nucleus, peroxisome | 21.92 | 23.72 |
| GSMUA_Achr8P34030_001 | Banana | cytosol | 23.44 | 23.32 |
| GSMUA_Achr3P22040_001 | Banana | cytosol | 26.48 | 22.89 |
| GSMUA_Achr2P22150_001 | Banana | cytosol | 22.6 | 22.71 |
| GSMUA_Achr3P14690_001 | Banana | nucleus | 26.31 | 22.16 |
| GSMUA_Achr1P18120_001 | Banana | cytosol | 25.3 | 22.06 |
| GSMUA_Achr11P... | Banana | mitochondrion | 24.62 | 21.73 |
| GSMUA_Achr11P... | Banana | cytosol, endoplasmic reticulum, nucleus | 23.44 | 21.09 |
| GSMUA_Achr7P04020_001 | Banana | cytosol | 24.62 | 20.86 |
| GSMUA_Achr1P26500_001 | Banana | cytosol | 18.04 | 20.3 |
| GSMUA_Achr11P... | Banana | cytosol | 22.43 | 19.97 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 21.25 | 19.5 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 19.73 | 19.44 |
| GSMUA_Achr9P08510_001 | Banana | nucleus | 23.95 | 18.16 |
| GSMUA_Achr3P00690_001 | Banana | nucleus | 15.51 | 18.15 |
| GSMUA_Achr1P17130_001 | Banana | nucleus | 17.71 | 17.3 |
| GSMUA_Achr3P19020_001 | Banana | cytosol | 23.78 | 17.09 |
| GSMUA_Achr3P24800_001 | Banana | nucleus | 17.2 | 16.92 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 17.03 | 16.42 |
| GSMUA_Achr11P... | Banana | nucleus | 19.56 | 16.04 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 17.88 | 15.87 |
| GSMUA_Achr4P21640_001 | Banana | nucleus | 18.72 | 15.86 |
| GSMUA_Achr11P... | Banana | cytosol | 17.2 | 15.45 |
| GSMUA_Achr8P10940_001 | Banana | nucleus | 19.06 | 15.35 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P04930_001 | EnsemblPlants:GSMUA_Achr7T04930_001 | EnsemblPlantsGene:GSMUA_Achr7G04930_001 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF3 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | UniParc:UPI000294BBEB | UniProt:M0TET3 |
| MapMan:35.1 | : | : | : | : | : |
Description
pumilio domain-containing protein PPD1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G04930_001]
Coordinates
chr7:-:3697263..3700488
Molecular Weight (calculated)
65906.9 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.474
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSTSKLED EDAVRLCHDR KNFIRQAIEQ RDRFADGHTA YIQSLMRVSL ALRNYVDGDE YNFFFTSCKT SPSHPIRSFN PEIIMIPMKP FTPKQKQHEK
101: STYADASFLS SPYERLRHPP ASPQASQLDF FWNPFSSYGY AYGNSLDEVL LDGNTHGQRK VWEDEGVPEL EGQADKNEKA RMKKGGKINI KPTAGKQPAD
201: AHKQKENMDD MKEFWLQGWQ RNRNSSQETP GFTVYINRRP TSMGEVMKDI EAQFVRICNS ASELSTFFEV SSTQPSSSSL QGGMLNPAAM APSTSSHMEE
301: SRAVPGSHKS TLDRLYEWEK KLYDEVKCGE RARIEYEKKC MQLKIQDVNE DEAFVVDKTS SSLRDLQTRL RVSISSTAYI SERIETLRDQ ELHPQVLELI
401: QKLASMWRTM AECHRIQKHT IDEAKLLLFS PSVAAVSAGI PPPRPSRFAA ALEAELRNWA SCLATWIEAQ RCYARALAGW IRRCAPPTLD AAASTPSRST
501: MGAPPAYGAC VRWSRMVDSV SEAAAIDGVE MFAAGVASVA AGQRREGVAE VEEAVGGRAA ELGPKVVCAG LAVAVGAVAE LAVNSAEGYD ELV
101: STYADASFLS SPYERLRHPP ASPQASQLDF FWNPFSSYGY AYGNSLDEVL LDGNTHGQRK VWEDEGVPEL EGQADKNEKA RMKKGGKINI KPTAGKQPAD
201: AHKQKENMDD MKEFWLQGWQ RNRNSSQETP GFTVYINRRP TSMGEVMKDI EAQFVRICNS ASELSTFFEV SSTQPSSSSL QGGMLNPAAM APSTSSHMEE
301: SRAVPGSHKS TLDRLYEWEK KLYDEVKCGE RARIEYEKKC MQLKIQDVNE DEAFVVDKTS SSLRDLQTRL RVSISSTAYI SERIETLRDQ ELHPQVLELI
401: QKLASMWRTM AECHRIQKHT IDEAKLLLFS PSVAAVSAGI PPPRPSRFAA ALEAELRNWA SCLATWIEAQ RCYARALAGW IRRCAPPTLD AAASTPSRST
501: MGAPPAYGAC VRWSRMVDSV SEAAAIDGVE MFAAGVASVA AGQRREGVAE VEEAVGGRAA ELGPKVVCAG LAVAVGAVAE LAVNSAEGYD ELV
001: MGCSHSKFDD DEAVQICKDR KRFIKQAVEH RTGFASGHIA YIQSLRKVSD ALREYIEGDE PHEFMLDTCV TPVKRMSSSG GFIEISPPSK MVQSEAESKL
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI
Arabidopsis Description
DUF630 family protein (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9SZW6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.