Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046842_P001 | Maize | nucleus | 97.33 | 89.9 |
| Zm00001d046839_P001 | Maize | nucleus | 97.07 | 89.66 |
| Zm00001d013369_P001 | Maize | nucleus | 97.07 | 59.97 |
| Zm00001d031530_P006 | Maize | nucleus | 93.33 | 44.42 |
| OQU80872 | Sorghum | nucleus | 88.53 | 41.71 |
| Zm00001d049762_P007 | Maize | nucleus | 88.0 | 41.41 |
| HORVU7Hr1G052210.21 | Barley | cytosol | 76.8 | 34.24 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 76.53 | 33.53 |
| TraesCS7B01G137800.1 | Wheat | nucleus | 75.47 | 32.64 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 76.27 | 31.6 |
| GSMUA_Achr7P04930_001 | Banana | nucleus | 38.93 | 24.62 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 50.13 | 24.51 |
| GSMUA_Achr3P00490_001 | Banana | nucleus | 40.53 | 24.44 |
| KRH19063 | Soybean | nucleus | 48.27 | 24.17 |
| KRH12287 | Soybean | nucleus | 49.33 | 23.93 |
| KRH02818 | Soybean | nucleus | 46.93 | 23.62 |
| PGSC0003DMT400015690 | Potato | nucleus | 47.47 | 23.3 |
| Solyc07g047830.2.1 | Tomato | nucleus | 47.2 | 23.2 |
| CDY28161 | Canola | nucleus | 12.53 | 22.93 |
| Bra011166.1-P | Field mustard | nucleus | 40.53 | 22.93 |
| KRH37304 | Soybean | nucleus | 46.4 | 22.75 |
| CDX68628 | Canola | nucleus | 40.53 | 22.49 |
| AT4G30130.3 | Thale cress | nucleus | 43.2 | 22.34 |
| CDY28162 | Canola | cytosol | 23.73 | 22.03 |
| CDY66508 | Canola | cytosol, nucleus | 24.8 | 21.99 |
| CDY39136 | Canola | nucleus | 42.67 | 21.25 |
| CDX82615 | Canola | nucleus | 42.13 | 20.95 |
| Bra038839.1-P | Field mustard | nucleus | 42.93 | 20.48 |
| AT2G19090.1 | Thale cress | nucleus | 44.27 | 20.39 |
| Bra038563.1-P | Field mustard | nucleus | 43.2 | 19.98 |
| Zm00001d053766_P001 | Maize | cytosol | 31.2 | 18.72 |
| Zm00001d022598_P001 | Maize | cytosol | 29.33 | 15.21 |
| Zm00001d048891_P002 | Maize | nucleus | 25.07 | 12.6 |
| Zm00001d017553_P001 | Maize | cytosol | 23.73 | 11.82 |
| Zm00001d028960_P001 | Maize | nucleus | 26.93 | 11.44 |
| Zm00001d038223_P001 | Maize | cytosol | 27.2 | 11.25 |
| Zm00001d051338_P002 | Maize | nucleus | 16.27 | 11.13 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 16.0 | 10.93 |
| Zm00001d002669_P002 | Maize | cytosol | 22.93 | 10.9 |
| Zm00001d026130_P001 | Maize | nucleus | 22.93 | 10.9 |
| Zm00001d022626_P001 | Maize | nucleus | 18.13 | 10.46 |
| Zm00001d000039_P001 | Maize | nucleus | 21.33 | 10.24 |
| Zm00001d029946_P003 | Maize | nucleus | 20.53 | 9.88 |
| Zm00001d011231_P001 | Maize | nucleus | 17.6 | 9.72 |
| Zm00001d011823_P002 | Maize | plastid | 23.2 | 9.69 |
| Zm00001d021452_P001 | Maize | nucleus | 23.47 | 9.35 |
| Zm00001d006286_P001 | Maize | nucleus | 22.67 | 9.3 |
| Zm00001d044312_P001 | Maize | nucleus | 17.33 | 9.27 |
| Zm00001d010488_P008 | Maize | cytosol | 17.6 | 8.39 |
| Zm00001d019173_P001 | Maize | nucleus | 15.73 | 7.95 |
| Zm00001d040901_P001 | Maize | mitochondrion | 0.8 | 1.18 |
Protein Annotations
| EnsemblPlants:Zm00001d012496_P001 | EnsemblPlants:Zm00001d012496_T001 | EnsemblPlantsGene:Zm00001d012496 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF3 | PFAM:PF04782 | PFAM:PF04783 | ProteinID:AQK99643.1 | SEG:seg | UniParc:UPI00084439D1 |
| UniProt:A0A1D6G929 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:175493827..175495209
Molecular Weight (calculated)
43483.4 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.871
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAASRLED EEAIKMCRDR RDLMKQALEQ HNRFASSPWD FFWNPFSSLD SFTYPRPRSS YDNVVTDDEL VRLQRVREEE GIPELEEEDD ECQEHVQMDR
101: KEEKEEHDNA DDDEDDDEDD GEEYEHSVEC MVSNVNFDAN MKQETKGFES KGIQCTEAPE PCETVELEIK AHKKELMRNR VANAEETPGF TVYLNRRPAS
201: LVEAMKDIDS KMLNPVAFLR SASSRSSSSR FLLAPSSSID DLFDNETSSC YSEESCSTMS GSHHSTLDRL YTWEKKLYKE VKAGERLRIE YEKRLTHLRN
301: QDVKGEEPTS VDKICAALRS LHTRLKVSIH TVQSVSRRIE ILRDEELHPQ LMELILDTET ISKHDVIRDF PSHLL
101: KEEKEEHDNA DDDEDDDEDD GEEYEHSVEC MVSNVNFDAN MKQETKGFES KGIQCTEAPE PCETVELEIK AHKKELMRNR VANAEETPGF TVYLNRRPAS
201: LVEAMKDIDS KMLNPVAFLR SASSRSSSSR FLLAPSSSID DLFDNETSSC YSEESCSTMS GSHHSTLDRL YTWEKKLYKE VKAGERLRIE YEKRLTHLRN
301: QDVKGEEPTS VDKICAALRS LHTRLKVSIH TVQSVSRRIE ILRDEELHPQ LMELILDTET ISKHDVIRDF PSHLL
001: MGCSHSKLDD EEAVQICKDR KRFIKQAIEH RTKFASGHIA YIHSLRKVSD ALHDFILQGD NNNEFVPTLC QDSFVTPVKR MPQRRRRSSR SNSGEFISIS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
101: PSSIPPKMIQ GRPRSNVKAN YLMANRSRPV RVEQRSPETF RVETFSPPSS SNQYGESDGF FGMNMNMNTS ASTSSSFWNP LSSPEQRLSS HNIPPPSPQN
201: SQWDFFWNPF SSLDYYGYNS YDRGSVDSRS GIDDEIRGLR RVREEEGIPD LEEDDEPHKP EPVVNVRFQN HNPNPKATEE NRGKVDKSCC NEEVKVEDVD
301: EDEDEDGDED DDEFTDSGCE TENEGDEKCV APPTQEQRKA EVCRGGEATG NVVGVGKVQE MKNVVGVRDD AKTTGFTVYV NRRPTSMAEV IKDLEDQFTT
401: ICDAAKEVSG LLEAGRAQYT SSFNDHSARK MLNPVALFRS GSSRSSSSRF LITSSGGSRE SGSESRSDVS DESCMISGSH QTTLDRLFAW EKKLYDEVRS
501: GERVRRAYEK KCMQLRNQDV KGDDPLAVDK TRATIRDLDT QIKVSIHSIE SISKRIETLR DQELLPQLLE LVEGLTRMWK VMAESHQIQK RTLDEAKLLL
601: AGTPVSKRHK KRQPPIMPEA INSQRLAQSA LNLEAQLRNW RTCFEFWITS QRSYMKALSG WLLRCFRCDP DPEKVRLSSC LHPIYRVCIQ WSRLLNSLNE
701: KPVLDKLEFF ASGMGSIYAR QVREDPNWSG SGSRRYSGSE SMELVVADKG EEDVVMTAEK LAEVAVKVLC HGMSVAVSSL AEFSINSADE HSKLVSQPAD
801: DASEQQPPDV NFNS
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G19090]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.