Factsheet for Zm00001d022626_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36086	Sorghum	nucleus	94.0	93.14
Os09t0538700-01	Rice	nucleus	85.08	84.69
TraesCS5D01G336000.1	Wheat	nucleus	80.92	79.1
TraesCS5B01G330400.1	Wheat	nucleus	81.08	78.66
HORVU5Hr1G084030.15	Barley	nucleus	80.92	77.58
GSMUA_Achr3P00690_001	Banana	nucleus	52.62	67.46
GSMUA_Achr1P26500_001	Banana	cytosol	52.77	65.09
VIT_04s0023g03760.t01	Wine grape	mitochondrion	55.23	57.26
KRH76635	Soybean	cytosol	54.62	56.8
PGSC0003DMT400009224	Potato	nucleus	34.46	56.71
Solyc02g083610.2.1	Tomato	nucleus	53.54	54.63
KRH28815	Soybean	cytosol	37.23	53.54
CDX77992	Canola	nucleus	51.69	53.42
CDX73734	Canola	nucleus	52.46	53.28
Bra036821.1-P	Field mustard	nucleus	52.15	52.97
KRH28816	Soybean	cytosol	2.62	51.52
KRH08031	Soybean	cytosol	29.85	44.39
AT3G51290.2	Thale cress	cytosol	52.92	43.11
Zm00001d011231_P001	Maize	nucleus	33.54	32.11
Zm00001d044312_P001	Maize	nucleus	34.31	31.81
Zm00001d029946_P003	Maize	nucleus	34.92	29.14
Zm00001d000039_P001	Maize	nucleus	34.92	29.07
Zm00001d017461_P001	Maize	cytosol, plastid	24.15	28.6
Zm00001d051338_P002	Maize	nucleus	22.77	27.01
Zm00001d040901_P001	Maize	mitochondrion	8.92	22.83
Zm00001d010488_P008	Maize	cytosol	26.31	21.73
Zm00001d019173_P001	Maize	nucleus	23.54	20.62
Zm00001d022598_P001	Maize	cytosol	22.92	20.61
Zm00001d017553_P001	Maize	cytosol	21.54	18.59
Zm00001d012496_P001	Maize	nucleus	10.46	18.13
Zm00001d046842_P001	Maize	nucleus	11.23	17.98
Zm00001d046839_P001	Maize	nucleus	11.23	17.98
Zm00001d053766_P001	Maize	cytosol	17.08	17.76
Zm00001d026130_P001	Maize	nucleus	20.46	16.86
Zm00001d048891_P002	Maize	nucleus	19.08	16.62
Zm00001d002669_P002	Maize	cytosol	19.85	16.35
Zm00001d031530_P006	Maize	nucleus	19.54	16.12
Zm00001d049762_P007	Maize	nucleus	19.38	15.81
Zm00001d028960_P001	Maize	nucleus	21.08	15.52
Zm00001d006286_P001	Maize	nucleus	21.38	15.21
Zm00001d021452_P001	Maize	nucleus	21.85	15.09
Zm00001d011823_P002	Maize	plastid	20.77	15.03
Zm00001d013369_P001	Maize	nucleus	13.69	14.66
Zm00001d038223_P001	Maize	cytosol	20.31	14.55

Protein Annotations

EnsemblPlants:Zm00001d022626_P001	EnsemblPlants:Zm00001d022626_T001	EnsemblPlantsGene:Zm00001d022626	InterPro:DUF630	InterPro:DUF632	ncoils:Coil
PANTHER:PTHR21450	PANTHER:PTHR21450:SF23	PFAM:PF04782	PFAM:PF04783	ProteinID:ONM61292.1	SEG:seg
UniParc:UPI0008450C72	UniProt:A0A1D6IPY4	MapMan:35.1	:	:	:

Description

Os09g0538750 protein

Coordinates

chr7:-:181607215..181610910

Molecular Weight (calculated)

71686.3 Da

IEP (calculated)

8.304

GRAVY (calculated)

-0.427

Length

650 amino acids

Sequence
(BLAST)

001: MGCCQSRLER LEAVSRCKAR RRYTKHLVQA RRDMAAAHAL YLRALRATGA SLLHFASAEA DHPHPHSSAA HHEPPPSPPP PPPPPPFSPS TTARSWTTNS
101: SSISASAILP PPPPPPLPPL PSSWDFWDPF APSSSRSAAD DADWDDAATT VVDAPIAAPP PVVTAAAAVA APPSIVTATT TSTTPSELTV VAVPRGGAGK
201: KDLAEIATEL DEYFLKAADA GARVAALLEA PVCEPPEPTT NSSLPGMPFL RQIRKVLSYS KSLKPMGWAW GGGGYGKGND GFTRFGRGDG GMPMGNGGGG
301: GMLSHSSTVE KLYAWEKKLF LEVKSYEGYK QEHDKKVSLL RKQEVKGVDY LKMEKNKMEI ESLESKMLVA NQSIETTTSE IIRLRESELF PQLLELIAGL
401: MSMWRGMYEC HQVQTHIVQQ LEYLNNARNT NPTSNVHRQA ALQLEIEVDR WYSAFCSLVK SQRDYVYSLT GWLRLSLFCH HDPLTKAQNS DIYGLCEEWQ
501: LAIDRIPDKV ASEGIKTLLT VIHAVVIQQA EEHKQKKRSE SAFKEFEKKA EELRALESKY VGAEGYREMS RKSSVADKRA KVEALRSRAD EEKIKYEKSI
601: GVTRAMTLNN LQTGFPNVFQ AMTGFASVCM EAFESVYNFK RSSDPKRLLT

Best Arabidopsis Sequence Match ( AT3G51290.2 )
(BLAST)

001: MGCCQSRIDS KEIVSRCKAR KRYLKHLVKA RQTLSVSHAL YLRSLRAVGS SLVHFSSKET PLHLHHNPPS PSPPPPPPPR PPPPPLSPGS ETTTWTTTTT
101: SSVLPPPPPP PPPPPPPSST WDFWDPFIPP PPSSSEEEWE EETTTATRTA TGTGSDAAVT TAPTTATPQA SSVVSGFSKD TMTTTTTGSE LAVVVSRNGK
201: DLMEIIKEVD EYFLKAADSG APLSSLLEIS TSITDFSGHS KSGKMYSSSN YECNLNPTSF WTRGFAPSKL SEYRNAGGVI GGNCIVGSHS STVDRLYAWE
301: KKLYQEVKYA ESIKMDHEKK VEQVRRLEMK RAEYVKTEKA KKDVEKLESQ LSVSSQAIQS ASNEIIKLRE TELYPQLVEL VKGLMCMWRS MYESHQVQTH
401: IVQQLKYLNT IPSTEPTSEL HRQSTLQLEL EVQQWHHSFC NLVKAQRDYI QSLTGWLRLS LFQFSKNPLV RSSYESKIYS FCEEWHLAID RIPDKVASEG
501: IKSFLTAVHG IVAQQADEHK QKKRTESMLK DFEKKSASLR ALESKYSPYS VPESRKKNPV IEKRVKVEML KGKAEEEKSK HEKSVSVTRA MTLNNLQMGF
601: PHVFQAMVGF SSVCMQAFES VYNQAKSIGE DQEEDYVPTV FDNFSANVVV NGSTVNLGLW DTAGQEDYNR LRPLSYRGAD VFILAFSLIS KASYENVSKK
701: WIPELKHYAP GVPIVLVGTK LDLRDDKQFF IDHPGAVPIT TAQGEELRKQ IGAPTYIECS SKTQENVKAV FDAAIRVVLQ PPKQKKKKSK AQKACSIL

Arabidopsis Description

Pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) [Source:UniProtKB/TrEMBL;Acc:F4J3B2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.