Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39486 | Sorghum | nucleus | 83.47 | 88.8 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 65.12 | 70.55 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 64.67 | 70.23 |
| TraesCS4B01G176800.1 | Wheat | cytosol | 64.55 | 70.11 |
| Os03t0321500-01 | Rice | plasma membrane | 66.7 | 69.87 |
| HORVU4Hr1G052040.1 | Barley | cytosol | 63.87 | 67.87 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 36.81 | 50.31 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 34.09 | 50.0 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 24.35 | 45.65 |
| AT2G27090.2 | Thale cress | nucleus | 37.37 | 44.41 |
| KRG89850 | Soybean | nucleus | 38.28 | 43.11 |
| KRH73448 | Soybean | nucleus | 37.6 | 42.4 |
| Bra012035.1-P | Field mustard | nucleus | 34.43 | 42.16 |
| CDY04477 | Canola | nucleus | 34.31 | 42.14 |
| KRH18693 | Soybean | nucleus | 38.17 | 41.86 |
| KRH14687 | Soybean | nucleus | 37.03 | 41.76 |
| Solyc09g007100.2.1 | Tomato | nucleus | 35.56 | 41.1 |
| CDX71474 | Canola | nucleus | 33.07 | 40.61 |
| PGSC0003DMT400005111 | Potato | nucleus | 35.33 | 40.57 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 17.33 | 40.16 |
| Zm00001d048891_P002 | Maize | nucleus | 26.5 | 31.37 |
| Zm00001d012496_P001 | Maize | nucleus | 11.44 | 26.93 |
| Zm00001d046842_P001 | Maize | nucleus | 12.0 | 26.11 |
| Zm00001d046839_P001 | Maize | nucleus | 12.0 | 26.11 |
| Zm00001d022598_P001 | Maize | cytosol | 18.8 | 22.96 |
| Zm00001d053766_P001 | Maize | cytosol | 14.95 | 21.12 |
| Zm00001d022626_P001 | Maize | nucleus | 15.52 | 21.08 |
| Zm00001d049762_P007 | Maize | nucleus | 18.57 | 20.58 |
| Zm00001d013369_P001 | Maize | nucleus | 14.04 | 20.43 |
| Zm00001d017461_P001 | Maize | cytosol, plastid | 12.46 | 20.04 |
| Zm00001d031530_P006 | Maize | nucleus | 17.78 | 19.92 |
| Zm00001d051338_P002 | Maize | nucleus | 12.12 | 19.53 |
| Zm00001d011231_P001 | Maize | nucleus | 14.72 | 19.15 |
| Zm00001d029946_P003 | Maize | nucleus | 16.76 | 19.0 |
| Zm00001d044312_P001 | Maize | nucleus | 14.84 | 18.69 |
| Zm00001d000039_P001 | Maize | nucleus | 16.31 | 18.44 |
| Zm00001d017553_P001 | Maize | cytosol | 14.84 | 17.4 |
| Zm00001d019173_P001 | Maize | nucleus | 14.5 | 17.25 |
| Zm00001d010488_P008 | Maize | cytosol | 14.84 | 16.65 |
| Zm00001d026130_P001 | Maize | nucleus | 14.84 | 16.6 |
| Zm00001d038223_P001 | Maize | cytosol | 16.76 | 16.32 |
| Zm00001d006286_P001 | Maize | nucleus | 16.76 | 16.19 |
| Zm00001d040901_P001 | Maize | mitochondrion | 4.64 | 16.14 |
| Zm00001d002669_P002 | Maize | cytosol | 14.27 | 15.97 |
| Zm00001d021452_P001 | Maize | nucleus | 16.87 | 15.83 |
| Zm00001d011823_P002 | Maize | plastid | 15.74 | 15.48 |
Protein Annotations
| EntrezGene:100382001 | MapMan:35.1 | UniProt:A0A1D6K139 | ncoils:Coil | InterPro:DUF630 | InterPro:DUF632 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0009506 | GO:GO:0016020 | ProteinID:ONL97488.1 |
| PFAM:PF04782 | PFAM:PF04783 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 | UniParc:UPI000844BC69 | EnsemblPlantsGene:Zm00001d028960 |
| EnsemblPlants:Zm00001d028960_P001 | EnsemblPlants:Zm00001d028960_T001 | SEG:seg | : | : | : |
Description
Expressed protein; protein
Coordinates
chr1:-:52938630..52943611
Molecular Weight (calculated)
99977.1 Da
IEP (calculated)
6.636
GRAVY (calculated)
-0.705
Length
883 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRSKNEDD KALVLCQERK RFVREALDGR CAFAATHFAY IQSLRHTGFA LRKFVEPEVP TDSSLFTSTS ATPEPPTIMQ KPMTISPSLS HHASDSFSPV
101: PSPLSSGRFH VNHMKAGGNS VTTVKEKVIE PVTATLETSS PVRGQAIHDL DDSSTFEAPP GTPPWDYFGL FQPVESQMSF HDDKELGHDF ENDDDIRRLR
201: EKEGIPELEE ELEKSPAYPD YLKRRLGQEK PPDLKDVEKS PMNGGEDDLA LSEDDFDNPT SESLVRMFKN RNDTPVAHIA TDHSSTSLPK DDLVSETIDS
301: QPERPKDDRA VDSQTERLKD VTPDDPQTEK PKDHAGVDSP TEKTKDHPGV DSPAEKPKHD MRVLDISMYE SDETPVTSPP KEISSSTAAF QVNGKFKKPL
401: HDVRNVARDL NSCIKEIEIL FIKASDSGKE VPRMLEADKV NFRPLLPEEK GCILVGFFTL LFHNSRIGSF DSKRKMESRK RRDQQHQAFL QHYLLVAERK
501: SLFLNRLAAA AATTITPPQA EVKYLTWHRS MSSLSSSSRI PLGTTSKEDT DGLNGNIFGG VYMNSGSHAS TLDRLYAWER KLYDEVKASS VVCRQYDEKC
601: RQLRHQESRG ESQMSIDKTR AVVKDLHSRI LVAIQRIDMI SKNIEDLRDK ELQPQLEELI GSLTRMWATM LECHRHQHDI IKLVSSTRNM KTSIRSESQF
701: QATLLLQVEL NTLCSNFQKW IASHKAYLQS LNSWLLKCVK ALQRKRKSSR KKNIKADPIT KYAVAPIFKT CESWINLLDD LPTDLEDAIK DLAADINRYV
801: PHQEKQRGGS KLTLSLSRSG RSNGEMGEVH RSYTPMDLQS SLETFLGKLE MFSDVSLQKY MKLKEDIDEA KERYEEAQAA QRI
101: PSPLSSGRFH VNHMKAGGNS VTTVKEKVIE PVTATLETSS PVRGQAIHDL DDSSTFEAPP GTPPWDYFGL FQPVESQMSF HDDKELGHDF ENDDDIRRLR
201: EKEGIPELEE ELEKSPAYPD YLKRRLGQEK PPDLKDVEKS PMNGGEDDLA LSEDDFDNPT SESLVRMFKN RNDTPVAHIA TDHSSTSLPK DDLVSETIDS
301: QPERPKDDRA VDSQTERLKD VTPDDPQTEK PKDHAGVDSP TEKTKDHPGV DSPAEKPKHD MRVLDISMYE SDETPVTSPP KEISSSTAAF QVNGKFKKPL
401: HDVRNVARDL NSCIKEIEIL FIKASDSGKE VPRMLEADKV NFRPLLPEEK GCILVGFFTL LFHNSRIGSF DSKRKMESRK RRDQQHQAFL QHYLLVAERK
501: SLFLNRLAAA AATTITPPQA EVKYLTWHRS MSSLSSSSRI PLGTTSKEDT DGLNGNIFGG VYMNSGSHAS TLDRLYAWER KLYDEVKASS VVCRQYDEKC
601: RQLRHQESRG ESQMSIDKTR AVVKDLHSRI LVAIQRIDMI SKNIEDLRDK ELQPQLEELI GSLTRMWATM LECHRHQHDI IKLVSSTRNM KTSIRSESQF
701: QATLLLQVEL NTLCSNFQKW IASHKAYLQS LNSWLLKCVK ALQRKRKSSR KKNIKADPIT KYAVAPIFKT CESWINLLDD LPTDLEDAIK DLAADINRYV
801: PHQEKQRGGS KLTLSLSRSG RSNGEMGEVH RSYTPMDLQS SLETFLGKLE MFSDVSLQKY MKLKEDIDEA KERYEEAQAA QRI
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.