Factsheet for Bra012035.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04477	Canola	nucleus	99.17	99.44
AT2G27090.2	Thale cress	nucleus	84.19	81.7
VIT_06s0009g01600.t01	Wine grape	nucleus	34.95	53.5
KRH18693	Soybean	nucleus	58.39	52.3
KRG89850	Soybean	nucleus	56.59	52.04
KRH14687	Soybean	nucleus	55.48	51.09
KRH73448	Soybean	nucleus	55.48	51.09
Solyc09g007100.2.1	Tomato	nucleus	54.09	51.05
PGSC0003DMT400005111	Potato	nucleus	53.68	50.33
VIT_06s0009g01610.t01	Wine grape	nucleus	26.21	49.61
GSMUA_Achr9P05210_001	Banana	nucleus	39.67	44.27
GSMUA_Achr6P32100_001	Banana	cytosol	36.62	43.85
KXG39486	Sorghum	nucleus	43.69	37.95
TraesCS4A01G128000.1	Wheat	cytosol	42.72	37.79
TraesCS4D01G178500.1	Wheat	cytosol	42.58	37.76
TraesCS4B01G176800.1	Wheat	cytosol	42.44	37.64
HORVU4Hr1G052040.1	Barley	cytosol	42.44	36.82
Os03t0321500-01	Rice	plasma membrane	42.58	36.42
TraesCS2A01G099100.1	Wheat	nucleus	27.32	36.28
Zm00001d028960_P001	Maize	nucleus	42.16	34.43
Os07t0686500-01	Rice	endoplasmic reticulum	33.15	33.47
Bra011832.1-P	Field mustard	nucleus	31.07	32.61
Bra011166.1-P	Field mustard	nucleus	22.75	24.74
Bra038839.1-P	Field mustard	nucleus	23.02	21.12
Bra036821.1-P	Field mustard	nucleus	18.72	21.09
Bra038563.1-P	Field mustard	nucleus	23.72	21.09
Bra009665.1-P	Field mustard	cytosol	19.83	20.23
Bra020807.1-P	Field mustard	nucleus	21.22	20.05
Bra007523.1-P	Field mustard	nucleus	19.69	19.64
Bra015667.1-P	Field mustard	nucleus	22.19	19.16
Bra011597.1-P	Field mustard	nucleus	21.91	18.9
Bra014497.1-P	Field mustard	nucleus	19.28	18.24
Bra009853.1-P	Field mustard	nucleus	18.31	17.96
Bra000365.1-P	Field mustard	nucleus	19.83	17.83
Bra017947.1-P	Field mustard	nucleus	22.19	17.45
Bra022983.1-P	Field mustard	cytosol	16.64	17.42
Bra018963.1-P	Field mustard	nucleus	17.75	17.07
Bra002985.1-P	Field mustard	nucleus	15.81	15.75
Bra025823.1-P	Field mustard	peroxisome	18.03	11.32

Protein Annotations

EnsemblPlants:Bra012035.1	EnsemblPlants:Bra012035.1-P	EnsemblPlantsGene:Bra012035	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0009506	GO:GO:0016020	InterPro:DUF630	InterPro:DUF632	ncoils:Coil	PANTHER:PTHR21450
PANTHER:PTHR21450:SF6	PFAM:PF04782	PFAM:PF04783	SEG:seg	UniParc:UPI00025418B7	UniProt:M4D6C6
MapMan:35.1	:	:	:	:	:

Description

AT2G27090 (E=7e-269) | unknown protein

Coordinates

chrA07:-:10485385..10487870

Molecular Weight (calculated)

81337.4 Da

IEP (calculated)

6.147

GRAVY (calculated)

-0.739

Length

721 amino acids

Sequence
(BLAST)

001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLRSTGT ALRRFAETEV PVESSLYTST SATPEQALAL TEKSVSHLSY SPPLSSPPPP
101: SSSPFQVNHM KFRGFSSKKV EEKPPVTVVA TVSVTSSSSV LRSMSMEKME SSTPFEESSS TPPPWDYFGL SHPIDSQFSS PHGHVSSSVK GEDEETREVE
201: EEEEEEEEDG ENFSFQERED SNGSDDEFDE PTSDTLVRSF ENFNRVRQRE GAESEKSKTP ELSPPVTPLA AAAATPLNKT PNHSENRLPP PRDFLSSMKE
301: VEMLFVKASE TGKEVPRMLE ANKLHFRPIA QSNQSGSGAS SLFKTCLSCG EDPKDVPEEE AAPNTMKYLT WHRTESSRSS SSLNPLGGMN SDDVEELNTN
401: LFENIGMIAG SHASTLDRLY AWERKLYDEV KGSQAVRREY DDKCKILREL ESEGKGSKII DKTRSVVKDL HSRIRVAIHR IDSISRRIEE LRDNELQPQL
501: EELIQGLSRM WEVMFECHKA QFQLISACHR RGNIKLNMQS ELHRQVTSHL ESELSALASS LTKWITGQRS YIKAIHEWLE KCVVLPRPSK RKRRAHQQPV
601: LRNLGPPIYA TCAIWLEKLE ALPAKEVSSS IKALASDVAR FLPRQEKKNR SKKQNDHMLR DETLEDCGPG FDRFRTSLEG FAGQLNRFAE SSVEMYEELK
701: QRIQEAKINY EQWKKACSQG N

Best Arabidopsis Sequence Match ( AT2G27090.2 )
(BLAST)

001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK

Arabidopsis Description

At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.