Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0686500-01 | Rice | endoplasmic reticulum | 61.69 | 46.92 |
| GSMUA_Achr6P32100_001 | Banana | cytosol | 41.99 | 37.87 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 52.49 | 34.97 |
| GSMUA_Achr9P05210_001 | Banana | nucleus | 39.41 | 33.13 |
| VIT_06s0009g01610.t01 | Wine grape | nucleus | 20.99 | 29.92 |
| Solyc09g007100.2.1 | Tomato | nucleus | 38.86 | 27.62 |
| CDX71474 | Canola | nucleus | 36.28 | 27.4 |
| Bra012035.1-P | Field mustard | nucleus | 36.28 | 27.32 |
| AT2G27090.2 | Thale cress | nucleus | 37.38 | 27.32 |
| PGSC0003DMT400005111 | Potato | nucleus | 38.67 | 27.31 |
| CDY04477 | Canola | nucleus | 36.1 | 27.26 |
| KRH73448 | Soybean | nucleus | 37.75 | 26.18 |
| KRH14687 | Soybean | nucleus | 37.2 | 25.8 |
| KRH18693 | Soybean | nucleus | 37.75 | 25.47 |
| KRG89850 | Soybean | nucleus | 36.46 | 25.26 |
| VIT_06s0009g01600.t01 | Wine grape | nucleus | 20.44 | 23.57 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 29.28 | 21.6 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 26.34 | 20.11 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 24.13 | 17.54 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 16.76 | 16.08 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 21.55 | 15.21 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 16.57 | 14.26 |
| TraesCS3A01G210200.1 | Wheat | nucleus | 18.23 | 14.2 |
| TraesCS3A01G198900.1 | Wheat | nucleus | 20.44 | 13.69 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 17.31 | 12.89 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 18.6 | 12.74 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 17.86 | 12.71 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 20.07 | 12.22 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 16.57 | 11.83 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 15.47 | 11.35 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 18.6 | 10.77 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 18.97 | 10.74 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 16.76 | 10.63 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G099100.1 | EnsemblPlantsGene:TraesCS2A01G099100 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF6 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2A:-:52119750..52122434
Molecular Weight (calculated)
61126.5 Da
IEP (calculated)
6.993
GRAVY (calculated)
-0.320
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVASSMIED DKVLVLCQER KRFVREALDG RCALACAHHD YIVSLRDTGS LLRNCFEGEK SPAAANKEGH VADSEDGFDN PSTETVAQVH KNPNDLPQIR
101: RIIGVITNEN DEIPATPLVN VVPSSAAART MDSQKPYPEV KNVVKDLSSS FMKEVEILFF RACDSGKQVP MILEEDKIQF RPLLPEEIAH GSKASKFLAT
201: FLVCCREEVS IPKPPPQAEI KYLTWHRSVS SQLSPSKNPP RTILVVHTST LDRLYAWETK LYDEVKANSS ICRKYDEKCK QLRDQESRGK KLIITDFTPA
301: AVEDLHSRIP VAIRKIYFIS MNIEDLRDKE LQALTMIWAT MLQCHRHQHG IIKSLSSSCK LQIPFDSDSH CQTVALLSAE LGKLRLNLQN WISSHKAYLR
401: SINLWLHKCM KPLRKRKSSR KQNAAAVDVS LAECAVAPMF AAGETWMKLL DDLPTEDLEE AIECLVAGIS RLLPRRLDQR LDETVKDGEA EQEVPRDDAA
501: ADLRSILVVF VEKLEAFSEV SVQKYLDLQR GVGAAKDRLV REA
101: RIIGVITNEN DEIPATPLVN VVPSSAAART MDSQKPYPEV KNVVKDLSSS FMKEVEILFF RACDSGKQVP MILEEDKIQF RPLLPEEIAH GSKASKFLAT
201: FLVCCREEVS IPKPPPQAEI KYLTWHRSVS SQLSPSKNPP RTILVVHTST LDRLYAWETK LYDEVKANSS ICRKYDEKCK QLRDQESRGK KLIITDFTPA
301: AVEDLHSRIP VAIRKIYFIS MNIEDLRDKE LQALTMIWAT MLQCHRHQHG IIKSLSSSCK LQIPFDSDSH CQTVALLSAE LGKLRLNLQN WISSHKAYLR
401: SINLWLHKCM KPLRKRKSSR KQNAAAVDVS LAECAVAPMF AAGETWMKLL DDLPTEDLEE AIECLVAGIS RLLPRRLDQR LDETVKDGEA EQEVPRDDAA
501: ADLRSILVVF VEKLEAFSEV SVQKYLDLQR GVGAAKDRLV REA
001: MGASTSRIDE DKALQLCRER KKFVQQALDG RCLLAAAHVS YVQSLKSTGT ALRKFSETEV PVESSLYTST SATPEQPLAL IEKSVSHLSY SPPPASHSHH
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
101: DTYSPPPSPP STSPFQVNHM KFKGFSSKKV EEKPPVSIIA TVTSSSIPPS RSIEKMESTP FEESSSMPPE APWDYFGLSH PIDNQFSSSH VGNGHVSRSV
201: KEEDGTPEEE DDGEDFSFQE REESRDSDDD EFDEPTSDTL VRSFENFNRV RRDHSTLPQR EGVESDSSDA EKSKTPELSP PVTPLVATPV NKTPNKGDHT
301: ENKLPPRDFL SSMKEIELLF VKASETGKEV PRMLEANKLH FRPIVPSKES GSGASSLFKT CLSCGEDPKD VPEEPAQNSV KYLTWHRTES SRSSSSRNPL
401: GGMNSDDVEE LNSNLFENIC MIAGSHASTL DRLYAWERKL YDEVKGSQTV RREYDEKCRI LRELESEGKG SQRIDKTRAV VKDLHSRIRV AIHRIDSISR
501: RIEELRDNEL QPQLEELIEG LSRMWEVMLE CHKVQFQLIK ACYRGGNIKL NMQSELHRQV TSHLEDELCA LASSFTKWIT GQKSYIQAIN EWLVKCVALP
601: QRSKRKRRAP QPSLRNYGPP IYATCGIWLE KLEVLPTKEV SGSIKALASD VARFLPRQEK NRTKKHRSGE NKNDLTAHML QDETLEDCGP GFDRFRTSLE
701: GFVGQLNQFA ESSVKMYEEL KEGIHGAKNN YEQLKKAYSS QGK
Arabidopsis Description
At2g27090 [Source:UniProtKB/TrEMBL;Acc:Q9ZVD1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.