Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G213000.1 | Wheat | nucleus | 98.13 | 97.85 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 96.13 | 95.85 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 93.54 | 93.68 |
| Os01t0585600-01 | Rice | nucleus | 76.18 | 77.52 |
| EES00973 | Sorghum | nucleus | 71.02 | 70.51 |
| Zm00001d044312_P001 | Maize | nucleus | 69.15 | 68.76 |
| Zm00001d011231_P001 | Maize | nucleus | 66.28 | 68.04 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 43.76 | 49.59 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 45.34 | 47.31 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 39.6 | 42.33 |
| CDX84637 | Canola | cytosol | 34.86 | 36.21 |
| Bra022983.1-P | Field mustard | cytosol | 35.15 | 35.56 |
| AT2G34670.2 | Thale cress | nucleus | 35.15 | 35.3 |
| CDX79570 | Canola | cytosol | 34.72 | 35.12 |
| KRH12768 | Soybean | cytosol | 30.13 | 33.44 |
| KRH37731 | Soybean | nucleus | 30.42 | 32.92 |
| TraesCS1A01G218200.1 | Wheat | nucleus | 29.41 | 26.66 |
| TraesCS6A01G243100.1 | Wheat | mitochondrion | 19.51 | 24.03 |
| TraesCS2A01G155900.1 | Wheat | nucleus | 22.24 | 21.26 |
| TraesCS3A01G198900.1 | Wheat | nucleus | 24.25 | 20.84 |
| TraesCS1A01G247500.1 | Wheat | nucleus | 23.67 | 20.81 |
| TraesCS5A01G335700.1 | Wheat | cytosol | 20.95 | 19.54 |
| TraesCS5A01G189900.1 | Wheat | cytosol | 19.08 | 18.71 |
| TraesCS2A01G099100.1 | Wheat | nucleus | 14.2 | 18.23 |
| TraesCS4A01G376900.1 | Wheat | nucleus | 19.08 | 18.07 |
| TraesCS6A01G253600.1 | Wheat | nucleus | 19.23 | 17.56 |
| TraesCS6A01G154500.2 | Wheat | cytosol | 15.64 | 17.27 |
| TraesCS2A01G405700.1 | Wheat | cytosol | 18.22 | 16.69 |
| TraesCS1A01G264800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 21.09 | 16.48 |
| TraesCS5A01G347200.1 | Wheat | nucleus | 21.66 | 15.75 |
| TraesCS4A01G128000.1 | Wheat | cytosol | 18.22 | 15.58 |
| TraesCS7A01G273600.1 | Wheat | cytosol, mitochondrion, nucleus | 20.52 | 15.25 |
| TraesCS3A01G503100.1 | Wheat | cytosol | 15.64 | 14.73 |
| TraesCS7A01G252800.1 | Wheat | nucleus | 17.07 | 13.9 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G210200.1 | EnsemblPlantsGene:TraesCS3A01G210200 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF21 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | SUPFAM:SSF101447 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3A:+:375769102..375772619
Molecular Weight (calculated)
77516.0 Da
IEP (calculated)
5.362
GRAVY (calculated)
-0.567
Length
697 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCRHSKVED EEAVRRCRDR RNLMKQLVRR RVDLAAAHIT YLHALRNTGA TLRQFAEVET ASSHQSLPVV ASPPPPPPPP PPPPPPPAYS VTSSMPPYSV
101: TSSMPPSPLP PPLIPFSPIR IRKREKRDGD LDGDDSTDED DDTDSCSTPL PPPPPPGMEW EYTDPITMRP LDFLPSSLAD RDDKEMASQV SMDDDWVETN
201: IEFDGQDQSV SGNADGILRR VELHPAKSRV MGDENSSMMS SWVTKDSNSS VMAWATDKSL VEIAKEIDEY FLKAAASGTD VVILLDSATG RLDPSEVQVK
301: KGKNSKSAKV FSTLSWSWSF KSVHANRESS TDACGYGYHG KTLDKLYDEE QKLYQLVKDE EFARLEYRKY SSLLKKLESG EHDRLQAEKV RENIEELQTR
401: IMSLEEAVSL TCLTISKIRD EELYPQVIEL AAGLVHMWRN MYECHEVQNH IAQQASLLGN QPGSEPTTDS HCYATSQLEG EVSAWHNSFC NLITLQREYV
501: TILNEWIGLT DCLPDNEGFM RSSSGIRSLC GELEHALKKL PEKVAAEAIK AFLSVIHSIV LQQAEERQLK KKSDNIESKF HAQLEKHSEN AMQSSSQGSH
601: ARSYSVSKDD PKLDVFRKKV EEEKARYINS LRTSRAMTLN HLQTSLPNVF HALTGFSGVC LQAFEGISRC SEAAAAAAAS HSGAASPAVS SCDDHPL
101: TSSMPPSPLP PPLIPFSPIR IRKREKRDGD LDGDDSTDED DDTDSCSTPL PPPPPPGMEW EYTDPITMRP LDFLPSSLAD RDDKEMASQV SMDDDWVETN
201: IEFDGQDQSV SGNADGILRR VELHPAKSRV MGDENSSMMS SWVTKDSNSS VMAWATDKSL VEIAKEIDEY FLKAAASGTD VVILLDSATG RLDPSEVQVK
301: KGKNSKSAKV FSTLSWSWSF KSVHANRESS TDACGYGYHG KTLDKLYDEE QKLYQLVKDE EFARLEYRKY SSLLKKLESG EHDRLQAEKV RENIEELQTR
401: IMSLEEAVSL TCLTISKIRD EELYPQVIEL AAGLVHMWRN MYECHEVQNH IAQQASLLGN QPGSEPTTDS HCYATSQLEG EVSAWHNSFC NLITLQREYV
501: TILNEWIGLT DCLPDNEGFM RSSSGIRSLC GELEHALKKL PEKVAAEAIK AFLSVIHSIV LQQAEERQLK KKSDNIESKF HAQLEKHSEN AMQSSSQGSH
601: ARSYSVSKDD PKLDVFRKKV EEEKARYINS LRTSRAMTLN HLQTSLPNVF HALTGFSGVC LQAFEGISRC SEAAAAAAAS HSGAASPAVS SCDDHPL
001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.