Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G210200.1 | Wheat | nucleus | 97.85 | 98.13 |
| TraesCS3B01G240800.1 | Wheat | nucleus | 96.85 | 96.85 |
| HORVU3Hr1G050880.1 | Barley | nucleus | 93.42 | 93.82 |
| Os01t0585600-01 | Rice | nucleus | 76.39 | 77.96 |
| EES00973 | Sorghum | nucleus | 71.24 | 70.94 |
| Zm00001d044312_P001 | Maize | nucleus | 69.53 | 69.33 |
| Zm00001d011231_P001 | Maize | nucleus | 66.81 | 68.78 |
| GSMUA_Achr9P30410_001 | Banana | cytosol | 43.63 | 49.59 |
| GSMUA_Achr5P00570_001 | Banana | cytosol | 45.92 | 48.05 |
| VIT_10s0003g04480.t01 | Wine grape | nucleus | 40.06 | 42.94 |
| CDX84637 | Canola | cytosol | 35.34 | 36.81 |
| Bra022983.1-P | Field mustard | cytosol | 35.62 | 36.14 |
| AT2G34670.2 | Thale cress | nucleus | 35.48 | 35.73 |
| CDX79570 | Canola | cytosol | 35.19 | 35.7 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 32.48 | 34.14 |
| KRH12768 | Soybean | cytosol | 30.62 | 34.08 |
| KRH37731 | Soybean | nucleus | 30.76 | 33.39 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 29.61 | 26.85 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 19.74 | 24.56 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 21.32 | 22.01 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 22.32 | 21.46 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 24.18 | 20.86 |
| TraesCS5D01G340500.1 | Wheat | plastid | 21.6 | 20.43 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 19.17 | 18.85 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 18.88 | 17.96 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 20.6 | 17.78 |
| TraesCS6D01G144300.1 | Wheat | cytosol | 15.59 | 17.22 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 18.45 | 16.91 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 18.31 | 16.86 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 21.32 | 16.59 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 21.6 | 15.66 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 18.17 | 15.62 |
| TraesCS3D01G509700.1 | Wheat | plastid | 19.46 | 14.78 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 18.88 | 14.59 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G213000.1 | EnsemblPlantsGene:TraesCS3D01G213000 | InterPro:DUF630 | InterPro:DUF632 | ncoils:Coil | PANTHER:PTHR21450 |
| PANTHER:PTHR21450:SF21 | PFAM:PF04782 | PFAM:PF04783 | SEG:seg | SUPFAM:SSF101447 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3D:+:286876281..286879738
Molecular Weight (calculated)
77804.2 Da
IEP (calculated)
5.230
GRAVY (calculated)
-0.584
Length
699 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCRHSKVED EEAVRRCRDR RNLMKQLVRR RVDLAAAHIT YLHALRNTGA TLRQFAEVET ASSHQSLQVA ASPPPPPPPP PPPPPPPPPP AYSVTSSMPP
101: YSVTSSMPPS PLPPPLIPFS PIRIRKREKR DGDLDGDDST DEDDDTDSCS TPLPPPPPPG MEWEYTDPIT MRPLDFLPSS LADRDDKEVA SQVSMDDDWV
201: ETNIEFDGQD ESVSGNADGI LRRVELHPAK SRVMGDENSS MMSSWVTKDS NSSVMAWATD KSLVEIAKEI DEYFLKAAAS GTDVVILLDS ATGRLDPSEV
301: QVKKGKNSKS AKVFSTLSWS WSFKSVHANR ESSSDACGYG YHGKTLDKLY DEEQKLYQLV KDEEFARLEY RKYSSLLKKL ESGEHDRLQA EKVRENIEEL
401: QTRIMSLEEA VSLTCLTISK LRDEELYPQV IELAAGLVHM WRNMYECHEV QNHIAQQASL LGNQPGSEPT TDSHCYATSQ LEGEVSAWHN SFCNLITLQR
501: EYVTILNEWI GLTDCLPDNE GFMRSSSGIR SLCGELEHAL KKLPEKVAAE AIKAFLSVIH SIVLQQAEER QLKKKSDNIE SKFHAQLEKH SENAMQSSDQ
601: GSHTRSYSVS KDDPKLDVFR KRVEEEKARY INSLRTSRAM TLNHLQTSLP NVFHALTGFS GVCVQAFEGI SRCSEAAAAA ASHPGAVSPA VSSCDDHPL
101: YSVTSSMPPS PLPPPLIPFS PIRIRKREKR DGDLDGDDST DEDDDTDSCS TPLPPPPPPG MEWEYTDPIT MRPLDFLPSS LADRDDKEVA SQVSMDDDWV
201: ETNIEFDGQD ESVSGNADGI LRRVELHPAK SRVMGDENSS MMSSWVTKDS NSSVMAWATD KSLVEIAKEI DEYFLKAAAS GTDVVILLDS ATGRLDPSEV
301: QVKKGKNSKS AKVFSTLSWS WSFKSVHANR ESSSDACGYG YHGKTLDKLY DEEQKLYQLV KDEEFARLEY RKYSSLLKKL ESGEHDRLQA EKVRENIEEL
401: QTRIMSLEEA VSLTCLTISK LRDEELYPQV IELAAGLVHM WRNMYECHEV QNHIAQQASL LGNQPGSEPT TDSHCYATSQ LEGEVSAWHN SFCNLITLQR
501: EYVTILNEWI GLTDCLPDNE GFMRSSSGIR SLCGELEHAL KKLPEKVAAE AIKAFLSVIH SIVLQQAEER QLKKKSDNIE SKFHAQLEKH SENAMQSSDQ
601: GSHTRSYSVS KDDPKLDVFR KRVEEEKARY INSLRTSRAM TLNHLQTSLP NVFHALTGFS GVCVQAFEGI SRCSEAAAAA ASHPGAVSPA VSSCDDHPL
001: MGCAASRIDN EEKVLVCRQR KRLMKKLLGF RGEFADAQLA YLRALRNTGV TLRQFTESET LELENTSYGL SLPLPPSPPP TLPPSPPPPP PFSPDLRNPE
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
101: TSHDLADEEE EGENDGGNDG SGAAPPPPLP NSWNIWNPFE SLELHSHPNG DNVVTQVELK KKQQIQQAEE EDWAETKSQF EEEDEQQEAG GTCLDLSVHQ
201: IEAVSGCNMK KPRRLKFKLG EVMDGNSSMT SCSGKDLEKT HVTDCRIRRT LEGIIRELDD YFLKASGCEK EIAVIVDINS RDTVDPFRYQ ETRRKRSSSA
301: KVFSALSWSW SSKSLQLGKD ATTSGTVEPC RPGAHCSTLE KLYTAEKKLY QLVRNKEIAK VEHERKSALL QKQDGETYDL SKMEKARLSL ESLETEIQRL
401: EDSITTTRSC LLNLINDELY PQLVALTSGL AQMWKTMLKC HQVQIHISQQ LNHLPDYPSI DLSSEYKRQA VNELETEVTC WYNSFCKLVN SQREYVKTLC
501: TWIQLTDRLS NEDNQRSSLP VAARKLCKEW QLVFEKLPDK VTSEAIKSFL MSIKSIIHQQ AEEYNLRRKC NKLERRLEKE LISLAEIERR LEGILAMEEE
601: EVSSTSLGSK HPLSIKQAKI EALRKRVDIE KTKYLNSVEV SKRMTLDNLK SSLPNVFQML TALANVFANG FESVNGQTGT DVSDTSQHSD ESQP
Arabidopsis Description
Protein of unknown function (DUF630 and DUF632) [Source:TAIR;Acc:AT2G34670]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.