Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G154500.2 | Wheat | cytosol | 95.1 | 95.4 |
| TraesCS6B01G182400.1 | Wheat | cytosol | 93.05 | 94.09 |
| HORVU0Hr1G015650.2 | Barley | cytosol, nucleus | 60.51 | 86.65 |
| Os02t0175200-00 | Rice | cytosol, mitochondrion | 35.39 | 71.11 |
| EES06355 | Sorghum | cytosol | 66.82 | 69.0 |
| Zm00001d053766_P001 | Maize | cytosol | 65.72 | 66.56 |
| Os02t0175301-00 | Rice | nucleus | 36.02 | 60.8 |
| CDY28161 | Canola | nucleus | 10.27 | 31.71 |
| CDY66508 | Canola | cytosol, nucleus | 21.17 | 31.68 |
| KRH02818 | Soybean | nucleus | 35.39 | 30.07 |
| CDY28162 | Canola | cytosol | 18.96 | 29.7 |
| KRH19063 | Soybean | nucleus | 35.07 | 29.64 |
| KRH37304 | Soybean | nucleus | 35.23 | 29.15 |
| Bra011166.1-P | Field mustard | nucleus | 30.33 | 28.96 |
| KRH12287 | Soybean | nucleus | 35.23 | 28.85 |
| PGSC0003DMT400015690 | Potato | nucleus | 34.28 | 28.4 |
| CDX68628 | Canola | nucleus | 30.33 | 28.4 |
| Solyc07g047830.2.1 | Tomato | nucleus | 33.97 | 28.18 |
| VIT_11s0103g00310.t01 | Wine grape | nucleus | 33.81 | 27.9 |
| AT4G30130.3 | Thale cress | nucleus | 31.6 | 27.59 |
| CDY39136 | Canola | nucleus | 32.39 | 27.22 |
| CDX82615 | Canola | nucleus | 32.39 | 27.19 |
| Bra038839.1-P | Field mustard | nucleus | 32.86 | 26.46 |
| AT2G19090.1 | Thale cress | nucleus | 33.65 | 26.17 |
| Bra038563.1-P | Field mustard | nucleus | 33.33 | 26.02 |
| TraesCS7D01G251500.1 | Wheat | cytosol | 34.6 | 24.2 |
| TraesCS5D01G340500.1 | Wheat | plastid | 22.59 | 19.35 |
| TraesCS5D01G336000.1 | Wheat | nucleus | 19.43 | 18.5 |
| TraesCS6D01G225400.1 | Wheat | cytosol, mitochondrion | 16.11 | 18.15 |
| TraesCS6D01G235200.1 | Wheat | nucleus | 20.54 | 17.04 |
| TraesCS5D01G201000.1 | Wheat | nucleus | 18.33 | 16.32 |
| TraesCS4D01G178500.1 | Wheat | cytosol | 20.7 | 16.11 |
| TraesCS1D01G246700.1 | Wheat | nucleus | 17.22 | 16.1 |
| TraesCS7D01G273600.1 | Wheat | cytosol | 20.54 | 16.05 |
| TraesCS2D01G402400.1 | Wheat | cytosol | 19.12 | 15.94 |
| TraesCS7D01G074000.2 | Wheat | nucleus | 18.33 | 15.78 |
| TraesCS3D01G213000.1 | Wheat | nucleus | 17.22 | 15.59 |
| TraesCS1D01G265000.1 | Wheat | nucleus | 22.12 | 15.59 |
| TraesCS3D01G202100.2 | Wheat | nucleus | 19.43 | 15.19 |
| TraesCS1D01G219800.1 | Wheat | nucleus | 18.48 | 15.18 |
| TraesCS3D01G509700.1 | Wheat | plastid | 21.8 | 15.0 |
| TraesCS5D01G353500.1 | Wheat | nucleus | 21.96 | 14.42 |
| TraesCS2D01G161700.1 | Wheat | nucleus | 15.96 | 13.89 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G144300.1 | EnsemblPlantsGene:TraesCS6D01G144300 | InterPro:DUF630 | InterPro:DUF632 | PANTHER:PTHR21450 | PANTHER:PTHR21450:SF3 |
| PFAM:PF04782 | PFAM:PF04783 | SEG:seg | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:+:115018024..115020263
Molecular Weight (calculated)
69062.9 Da
IEP (calculated)
5.046
GRAVY (calculated)
-0.465
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSSSKKLD EEEAVKTCHD RRSFVKKAIA QRDLLASSHV AYLQSLRRVS LALFYCLAED EHLYFLQDTA AQCTHRPCSP EKRAVLLVVN RLRQGGAPVH
101: PLVGRWDGEA GAPEAAVVDG FFGVDPRLFR PPANDVPVSS PSHLPSAWDV FWVDPFSSLP TDRVGYVNHN HGVEEVRNAD QEDGEMLELE EISEDGSNGE
201: DESEKEEAHG HEQAERAQVV VAPREEEEKR VVGVSKKLRV RASAEVEQQS TPGRFTVFVD RPPASVAEAM RDIKGHFSKI AETAAEVSVL LEVVPYQKKV
301: RPPAQRGDVE GGDGDEQVGT REASPEPFQL FQSHKESLDR LYAWEKKLYE EVRAGERVRL SYEKKVAQLR SQDANGAEPF AIERTRAAIR DLRTKLNISL
401: ASVDAVSRRI VAVRDDELLP QLAELIRGLA RMWRVIGDAH RVMKRTADEA SALLSSSAAG AEGGIRGPPP PPGPTRAATA AGALATELRG WRAALEAWAE
501: SQRGYAAALW GWARSCVKDG EDMPRLIVAW ARAVEAVDVD AATRAVEGVA AEAAAIAAAA RRRSSSAEEE PPNEEEGKRR VCVGLAAALG AIAEAGGLAS
601: AAYRELVAEM NDREREAEMA GRDDEPSIQN NPP
101: PLVGRWDGEA GAPEAAVVDG FFGVDPRLFR PPANDVPVSS PSHLPSAWDV FWVDPFSSLP TDRVGYVNHN HGVEEVRNAD QEDGEMLELE EISEDGSNGE
201: DESEKEEAHG HEQAERAQVV VAPREEEEKR VVGVSKKLRV RASAEVEQQS TPGRFTVFVD RPPASVAEAM RDIKGHFSKI AETAAEVSVL LEVVPYQKKV
301: RPPAQRGDVE GGDGDEQVGT REASPEPFQL FQSHKESLDR LYAWEKKLYE EVRAGERVRL SYEKKVAQLR SQDANGAEPF AIERTRAAIR DLRTKLNISL
401: ASVDAVSRRI VAVRDDELLP QLAELIRGLA RMWRVIGDAH RVMKRTADEA SALLSSSAAG AEGGIRGPPP PPGPTRAATA AGALATELRG WRAALEAWAE
501: SQRGYAAALW GWARSCVKDG EDMPRLIVAW ARAVEAVDVD AATRAVEGVA AEAAAIAAAA RRRSSSAEEE PPNEEEGKRR VCVGLAAALG AIAEAGGLAS
601: AAYRELVAEM NDREREAEMA GRDDEPSIQN NPP
001: MGCSHSKFDD DEAVQICKDR KRFIKQAVEH RTGFASGHIA YIQSLRKVSD ALREYIEGDE PHEFMLDTCV TPVKRMSSSG GFIEISPPSK MVQSEAESKL
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI
101: NVNSYLMASG SRPVRVEEKP PRSPETFQVE TYGADSFFGM NMNMNSPGLG SHNIPPPSPQ NSQWDFFWNP FSALDQYGYS YDNQNGMDDD MRRLRRVREE
201: EGIPDLEEDE YVKFEDHHNM KATEDFNGGK MYQEDKVEHV NEEFTDSGCK IENESDKNCN GTQERRSLEV SRGGTTGHVV GVTSDDGKGE TPGFTVYLNR
301: RPTSMAEVIK DLEDQFAIIC TAGKEVSGLL EASRVQYTSS NELSAMTMLN PVALFRSGGS SRSSSSSRFL ISSSGGSRAS EFESSSEFSE ESCMLSGSHQ
401: STLDRLYAWE KKLYDEVKSG DRIRIAYEKK CLVLRNQDVK GADSSAVDKT RATIRDLHTQ IKVSIHSIES ISERIETLRD QELLPQLLEL VQGLAQMWKV
501: MAECHQIQKR TLDEAKLLLA TTPSNRHKKQ QQTSLPEINS QRLARSALHL VVQLRNWRAC FQAWITSQRS YILSLTGWLL RCFRCDPDPE KVTLTSCPHP
601: IYEVCIQWSR LLNGLNEKPV LDKLDFFASG MGAIYARQLK EDTSPVTDSS RKYSRPESME LVEAEKVEEE KIMTAEKLAE IAVKVLCHGM SVAVSSLAEF
701: SISSADEHSK LVTHREEDMP EQTKI
Arabidopsis Description
DUF630 family protein (DUF630 and DUF632) [Source:UniProtKB/TrEMBL;Acc:Q9SZW6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.